Protein–RNA interactions for Protein: O75954

TSPAN9, Tetraspanin-9, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9O75954 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TSPAN9O75954 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TSPAN9O75954 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TSPAN9O75954 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TSPAN9O75954 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TSPAN9O75954 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TSPAN9O75954 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TSPAN9O75954 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TSPAN9O75954 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSPAN9O75954 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSPAN9O75954 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSPAN9O75954 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSPAN9O75954 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.72■□□□□ 0.59
TSPAN9O75954 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSPAN9O75954 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.72■□□□□ 0.59
TSPAN9O75954 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.72■□□□□ 0.59
TSPAN9O75954 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TSPAN9O75954 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.72■□□□□ 0.59
TSPAN9O75954 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.72■□□□□ 0.59
TSPAN9O75954 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.72■□□□□ 0.59
TSPAN9O75954 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.72■□□□□ 0.59
TSPAN9O75954 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSPAN9O75954 AC127496.7-201ENST00000625110 1798 ntBASIC18.72■□□□□ 0.59
TSPAN9O75954 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TSPAN9O75954 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSPAN9O75954 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSPAN9O75954 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
TSPAN9O75954 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TSPAN9O75954 AC141586.4-201ENST00000624558 1573 ntBASIC18.72■□□□□ 0.59
TSPAN9O75954 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TSPAN9O75954 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TSPAN9O75954 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.71■□□□□ 0.59
TSPAN9O75954 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.71■□□□□ 0.59
TSPAN9O75954 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.71■□□□□ 0.59
TSPAN9O75954 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.71■□□□□ 0.59
TSPAN9O75954 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TSPAN9O75954 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.71■□□□□ 0.59
TSPAN9O75954 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TSPAN9O75954 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TSPAN9O75954 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TSPAN9O75954 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TSPAN9O75954 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TSPAN9O75954 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TSPAN9O75954 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TSPAN9O75954 TSPY9P-201ENST00000440215 945 ntBASIC18.7■□□□□ 0.58
TSPAN9O75954 TSPY11P-201ENST00000442607 1045 ntBASIC18.7■□□□□ 0.58
TSPAN9O75954 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.7■□□□□ 0.58
TSPAN9O75954 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.7■□□□□ 0.58
TSPAN9O75954 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.7■□□□□ 0.58
TSPAN9O75954 AL158211.5-201ENST00000623583 2518 ntBASIC18.7■□□□□ 0.58
TSPAN9O75954 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TSPAN9O75954 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TSPAN9O75954 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TSPAN9O75954 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TSPAN9O75954 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TSPAN9O75954 AC019069.1-201ENST00000610008 1333 ntBASIC18.7■□□□□ 0.58
TSPAN9O75954 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TSPAN9O75954 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TSPAN9O75954 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TSPAN9O75954 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
TSPAN9O75954 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TSPAN9O75954 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TSPAN9O75954 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.69■□□□□ 0.58
TSPAN9O75954 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TSPAN9O75954 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TSPAN9O75954 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TSPAN9O75954 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TSPAN9O75954 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.69■□□□□ 0.58
TSPAN9O75954 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TSPAN9O75954 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.69■□□□□ 0.58
TSPAN9O75954 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TSPAN9O75954 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.69■□□□□ 0.58
TSPAN9O75954 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TSPAN9O75954 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TSPAN9O75954 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TSPAN9O75954 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TSPAN9O75954 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.68■□□□□ 0.58
TSPAN9O75954 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.68■□□□□ 0.58
TSPAN9O75954 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TSPAN9O75954 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TSPAN9O75954 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.68■□□□□ 0.58
TSPAN9O75954 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.68■□□□□ 0.58
TSPAN9O75954 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TSPAN9O75954 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TSPAN9O75954 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.68■□□□□ 0.58
TSPAN9O75954 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TSPAN9O75954 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
TSPAN9O75954 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TSPAN9O75954 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TSPAN9O75954 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.67■□□□□ 0.58
TSPAN9O75954 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TSPAN9O75954 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TSPAN9O75954 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.67■□□□□ 0.58
TSPAN9O75954 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
TSPAN9O75954 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TSPAN9O75954 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TSPAN9O75954 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TSPAN9O75954 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TSPAN9O75954 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
TSPAN9O75954 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms