Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
UPK1AO00322 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
UPK1AO00322 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.87■□□□□ 0.93
UPK1AO00322 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
UPK1AO00322 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UPK1AO00322 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UPK1AO00322 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.87■□□□□ 0.93
UPK1AO00322 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.87■□□□□ 0.93
UPK1AO00322 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.87■□□□□ 0.93
UPK1AO00322 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.87■□□□□ 0.93
UPK1AO00322 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
UPK1AO00322 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UPK1AO00322 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
UPK1AO00322 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.86■□□□□ 0.93
UPK1AO00322 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UPK1AO00322 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UPK1AO00322 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UPK1AO00322 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UPK1AO00322 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
UPK1AO00322 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
UPK1AO00322 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.86■□□□□ 0.93
UPK1AO00322 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.86■□□□□ 0.93
UPK1AO00322 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
UPK1AO00322 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.86■□□□□ 0.93
UPK1AO00322 LINC01529-204ENST00000636474 1715 ntBASIC20.86■□□□□ 0.93
UPK1AO00322 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
UPK1AO00322 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
UPK1AO00322 FP325331.1-202ENST00000623531 1380 ntBASIC20.85■□□□□ 0.93
UPK1AO00322 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UPK1AO00322 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UPK1AO00322 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.85■□□□□ 0.93
UPK1AO00322 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
UPK1AO00322 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UPK1AO00322 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.85■□□□□ 0.93
UPK1AO00322 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.85■□□□□ 0.93
UPK1AO00322 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.85■□□□□ 0.93
UPK1AO00322 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UPK1AO00322 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
UPK1AO00322 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
UPK1AO00322 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
UPK1AO00322 C11orf96-202ENST00000528572 1834 ntBASIC20.85■□□□□ 0.93
UPK1AO00322 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
UPK1AO00322 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
UPK1AO00322 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.85■□□□□ 0.93
UPK1AO00322 C17orf82-201ENST00000623772 1530 ntBASIC20.84■□□□□ 0.93
UPK1AO00322 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
UPK1AO00322 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.84■□□□□ 0.93
UPK1AO00322 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UPK1AO00322 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.84■□□□□ 0.93
UPK1AO00322 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.84■□□□□ 0.93
UPK1AO00322 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UPK1AO00322 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UPK1AO00322 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
UPK1AO00322 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
UPK1AO00322 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
UPK1AO00322 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
UPK1AO00322 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
UPK1AO00322 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.84■□□□□ 0.93
UPK1AO00322 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
UPK1AO00322 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UPK1AO00322 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UPK1AO00322 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
UPK1AO00322 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
UPK1AO00322 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
UPK1AO00322 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.83■□□□□ 0.93
UPK1AO00322 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
UPK1AO00322 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
UPK1AO00322 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UPK1AO00322 AL117332.1-201ENST00000622628 974 ntBASIC20.83■□□□□ 0.93
UPK1AO00322 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UPK1AO00322 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
UPK1AO00322 AC092053.2-201ENST00000640557 1818 ntBASIC20.83■□□□□ 0.92
UPK1AO00322 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
UPK1AO00322 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
UPK1AO00322 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.82■□□□□ 0.92
UPK1AO00322 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
UPK1AO00322 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
UPK1AO00322 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.82■□□□□ 0.92
UPK1AO00322 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UPK1AO00322 AL356441.2-201ENST00000443009 864 ntBASIC20.82■□□□□ 0.92
UPK1AO00322 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.82■□□□□ 0.92
UPK1AO00322 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.82■□□□□ 0.92
UPK1AO00322 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.82■□□□□ 0.92
UPK1AO00322 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
UPK1AO00322 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
UPK1AO00322 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
UPK1AO00322 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.81■□□□□ 0.92
UPK1AO00322 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
UPK1AO00322 MIR3621-201ENST00000580529 85 ntBASIC20.81■□□□□ 0.92
UPK1AO00322 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
UPK1AO00322 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.81■□□□□ 0.92
UPK1AO00322 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.81■□□□□ 0.92
UPK1AO00322 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UPK1AO00322 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.81■□□□□ 0.92
UPK1AO00322 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UPK1AO00322 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UPK1AO00322 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UPK1AO00322 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UPK1AO00322 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UPK1AO00322 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms