Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC13.93□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC13.92□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC13.92□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC13.92□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC13.92□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC13.92□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC13.92□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC13.91□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC13.91□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC13.91□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 AC080038.3-201ENST00000623346 1952 ntBASIC13.91□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC13.91□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC13.91□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC13.91□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC13.9□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC13.9□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC13.9□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC13.9□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC13.9□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC13.9□□□□□ -0.18
TMEM256-PLSCR3K7ERE1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC13.9□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC13.89□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC13.89□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC13.88□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 AC010542.4-201ENST00000563151 1910 ntBASIC13.88□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC13.88□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms