Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
COLCA2A8K830 AL161729.1-201ENST00000604104 1402 ntBASIC17.04■□□□□ 0.32
COLCA2A8K830 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
COLCA2A8K830 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.04■□□□□ 0.32
COLCA2A8K830 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COLCA2A8K830 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COLCA2A8K830 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COLCA2A8K830 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.03■□□□□ 0.32
COLCA2A8K830 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.03■□□□□ 0.32
COLCA2A8K830 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COLCA2A8K830 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COLCA2A8K830 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.03■□□□□ 0.32
COLCA2A8K830 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.03■□□□□ 0.32
COLCA2A8K830 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COLCA2A8K830 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.03■□□□□ 0.32
COLCA2A8K830 KLF16-203ENST00000592313 508 ntTSL 3 BASIC17.03■□□□□ 0.32
COLCA2A8K830 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.03■□□□□ 0.32
COLCA2A8K830 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
COLCA2A8K830 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COLCA2A8K830 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COLCA2A8K830 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.03■□□□□ 0.32
COLCA2A8K830 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COLCA2A8K830 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
COLCA2A8K830 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
COLCA2A8K830 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
COLCA2A8K830 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
COLCA2A8K830 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
COLCA2A8K830 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COLCA2A8K830 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.02■□□□□ 0.32
COLCA2A8K830 FEM1AP4-201ENST00000443167 1987 ntBASIC17.02■□□□□ 0.32
COLCA2A8K830 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.02■□□□□ 0.32
COLCA2A8K830 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
COLCA2A8K830 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.02■□□□□ 0.32
COLCA2A8K830 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
COLCA2A8K830 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
COLCA2A8K830 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
COLCA2A8K830 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COLCA2A8K830 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COLCA2A8K830 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.02■□□□□ 0.32
COLCA2A8K830 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
COLCA2A8K830 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COLCA2A8K830 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.01■□□□□ 0.31
COLCA2A8K830 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COLCA2A8K830 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
COLCA2A8K830 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COLCA2A8K830 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
COLCA2A8K830 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COLCA2A8K830 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COLCA2A8K830 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COLCA2A8K830 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
COLCA2A8K830 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
COLCA2A8K830 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
COLCA2A8K830 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COLCA2A8K830 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COLCA2A8K830 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC17.01■□□□□ 0.31
COLCA2A8K830 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
COLCA2A8K830 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COLCA2A8K830 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COLCA2A8K830 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COLCA2A8K830 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COLCA2A8K830 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
COLCA2A8K830 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17■□□□□ 0.31
COLCA2A8K830 AC018445.3-201ENST00000624177 1945 ntBASIC17■□□□□ 0.31
COLCA2A8K830 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
COLCA2A8K830 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC17■□□□□ 0.31
COLCA2A8K830 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17■□□□□ 0.31
COLCA2A8K830 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
COLCA2A8K830 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17■□□□□ 0.31
COLCA2A8K830 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC17■□□□□ 0.31
COLCA2A8K830 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
COLCA2A8K830 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
COLCA2A8K830 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
COLCA2A8K830 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
COLCA2A8K830 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17■□□□□ 0.31
COLCA2A8K830 AL359504.2-201ENST00000605506 1601 ntBASIC16.99■□□□□ 0.31
COLCA2A8K830 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
COLCA2A8K830 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COLCA2A8K830 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
COLCA2A8K830 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COLCA2A8K830 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
COLCA2A8K830 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COLCA2A8K830 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC16.99■□□□□ 0.31
COLCA2A8K830 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
COLCA2A8K830 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
COLCA2A8K830 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
COLCA2A8K830 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
COLCA2A8K830 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
COLCA2A8K830 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COLCA2A8K830 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COLCA2A8K830 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
COLCA2A8K830 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COLCA2A8K830 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COLCA2A8K830 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
COLCA2A8K830 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
COLCA2A8K830 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC16.97■□□□□ 0.31
COLCA2A8K830 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
COLCA2A8K830 BX323043.1-201ENST00000641006 1765 ntBASIC16.97■□□□□ 0.31
COLCA2A8K830 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
COLCA2A8K830 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.97■□□□□ 0.31
COLCA2A8K830 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms