Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.81■□□□□ 0.6
MEIS3P1A6NDR6 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
MEIS3P1A6NDR6 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.81■□□□□ 0.6
MEIS3P1A6NDR6 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
MEIS3P1A6NDR6 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MEIS3P1A6NDR6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.8■□□□□ 0.6
MEIS3P1A6NDR6 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MEIS3P1A6NDR6 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MEIS3P1A6NDR6 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MEIS3P1A6NDR6 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.8■□□□□ 0.6
MEIS3P1A6NDR6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
MEIS3P1A6NDR6 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.8■□□□□ 0.6
MEIS3P1A6NDR6 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MEIS3P1A6NDR6 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MEIS3P1A6NDR6 AC005229.4-201ENST00000610085 2198 ntBASIC18.8■□□□□ 0.6
MEIS3P1A6NDR6 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.8■□□□□ 0.6
MEIS3P1A6NDR6 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MEIS3P1A6NDR6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MEIS3P1A6NDR6 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.8■□□□□ 0.6
MEIS3P1A6NDR6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MEIS3P1A6NDR6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MEIS3P1A6NDR6 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MEIS3P1A6NDR6 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MEIS3P1A6NDR6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MEIS3P1A6NDR6 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MEIS3P1A6NDR6 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MEIS3P1A6NDR6 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MEIS3P1A6NDR6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MEIS3P1A6NDR6 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
MEIS3P1A6NDR6 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MEIS3P1A6NDR6 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
MEIS3P1A6NDR6 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.79■□□□□ 0.6
MEIS3P1A6NDR6 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MEIS3P1A6NDR6 AC010542.4-201ENST00000563151 1910 ntBASIC18.78■□□□□ 0.6
MEIS3P1A6NDR6 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
MEIS3P1A6NDR6 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MEIS3P1A6NDR6 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MEIS3P1A6NDR6 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MEIS3P1A6NDR6 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
MEIS3P1A6NDR6 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MEIS3P1A6NDR6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
MEIS3P1A6NDR6 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.78■□□□□ 0.6
MEIS3P1A6NDR6 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MEIS3P1A6NDR6 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.77■□□□□ 0.6
MEIS3P1A6NDR6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MEIS3P1A6NDR6 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MEIS3P1A6NDR6 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.77■□□□□ 0.6
MEIS3P1A6NDR6 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MEIS3P1A6NDR6 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.77■□□□□ 0.6
MEIS3P1A6NDR6 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MEIS3P1A6NDR6 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.77■□□□□ 0.6
MEIS3P1A6NDR6 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MEIS3P1A6NDR6 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MEIS3P1A6NDR6 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
MEIS3P1A6NDR6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MEIS3P1A6NDR6 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MEIS3P1A6NDR6 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.77■□□□□ 0.59
MEIS3P1A6NDR6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.77■□□□□ 0.59
MEIS3P1A6NDR6 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
MEIS3P1A6NDR6 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.76■□□□□ 0.59
MEIS3P1A6NDR6 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.76■□□□□ 0.59
MEIS3P1A6NDR6 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.76■□□□□ 0.59
MEIS3P1A6NDR6 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MEIS3P1A6NDR6 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MEIS3P1A6NDR6 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MEIS3P1A6NDR6 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MEIS3P1A6NDR6 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.76■□□□□ 0.59
MEIS3P1A6NDR6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MEIS3P1A6NDR6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.76■□□□□ 0.59
MEIS3P1A6NDR6 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
MEIS3P1A6NDR6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
MEIS3P1A6NDR6 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
MEIS3P1A6NDR6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.76■□□□□ 0.59
MEIS3P1A6NDR6 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
MEIS3P1A6NDR6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
MEIS3P1A6NDR6 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
MEIS3P1A6NDR6 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.75■□□□□ 0.59
MEIS3P1A6NDR6 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.75■□□□□ 0.59
MEIS3P1A6NDR6 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
MEIS3P1A6NDR6 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.75■□□□□ 0.59
MEIS3P1A6NDR6 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.75■□□□□ 0.59
MEIS3P1A6NDR6 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MEIS3P1A6NDR6 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MEIS3P1A6NDR6 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MEIS3P1A6NDR6 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MEIS3P1A6NDR6 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
MEIS3P1A6NDR6 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MEIS3P1A6NDR6 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.74■□□□□ 0.59
MEIS3P1A6NDR6 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.74■□□□□ 0.59
MEIS3P1A6NDR6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MEIS3P1A6NDR6 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MEIS3P1A6NDR6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MEIS3P1A6NDR6 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MEIS3P1A6NDR6 AC073130.3-201ENST00000624389 2278 ntBASIC18.74■□□□□ 0.59
MEIS3P1A6NDR6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MEIS3P1A6NDR6 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.73■□□□□ 0.59
MEIS3P1A6NDR6 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
MEIS3P1A6NDR6 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MEIS3P1A6NDR6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
MEIS3P1A6NDR6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms