Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-4A0A1B0GX49 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-4A0A1B0GX49 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-4A0A1B0GX49 PKD1P6-201ENST00000343738 4769 ntBASIC15.5■□□□□ 0.07
TRBV6-4A0A1B0GX49 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-4A0A1B0GX49 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-4A0A1B0GX49 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC15.5■□□□□ 0.07
TRBV6-4A0A1B0GX49 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC15.5■□□□□ 0.07
TRBV6-4A0A1B0GX49 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
TRBV6-4A0A1B0GX49 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC15.5■□□□□ 0.07
TRBV6-4A0A1B0GX49 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-4A0A1B0GX49 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
TRBV6-4A0A1B0GX49 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC15.5■□□□□ 0.07
TRBV6-4A0A1B0GX49 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-4A0A1B0GX49 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-4A0A1B0GX49 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-4A0A1B0GX49 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC15.49■□□□□ 0.07
TRBV6-4A0A1B0GX49 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TRBV6-4A0A1B0GX49 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV6-4A0A1B0GX49 LSR-203ENST00000360798 1963 ntTSL 2 BASIC15.49■□□□□ 0.07
TRBV6-4A0A1B0GX49 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV6-4A0A1B0GX49 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
TRBV6-4A0A1B0GX49 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC15.49■□□□□ 0.07
TRBV6-4A0A1B0GX49 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC15.49■□□□□ 0.07
TRBV6-4A0A1B0GX49 GATM-206ENST00000558336 1522 ntTSL 2 BASIC15.49■□□□□ 0.07
TRBV6-4A0A1B0GX49 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV6-4A0A1B0GX49 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
TRBV6-4A0A1B0GX49 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV6-4A0A1B0GX49 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV6-4A0A1B0GX49 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC15.49■□□□□ 0.07
TRBV6-4A0A1B0GX49 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV6-4A0A1B0GX49 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC15.49■□□□□ 0.07
TRBV6-4A0A1B0GX49 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRBV6-4A0A1B0GX49 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC15.49■□□□□ 0.07
TRBV6-4A0A1B0GX49 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-4A0A1B0GX49 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC15.48■□□□□ 0.07
TRBV6-4A0A1B0GX49 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-4A0A1B0GX49 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-4A0A1B0GX49 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-4A0A1B0GX49 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TRBV6-4A0A1B0GX49 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-4A0A1B0GX49 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-4A0A1B0GX49 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC15.48■□□□□ 0.07
TRBV6-4A0A1B0GX49 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC15.48■□□□□ 0.07
TRBV6-4A0A1B0GX49 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-4A0A1B0GX49 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-4A0A1B0GX49 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC15.48■□□□□ 0.07
TRBV6-4A0A1B0GX49 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
TRBV6-4A0A1B0GX49 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-4A0A1B0GX49 EP400NL-214ENST00000641289 2402 ntBASIC15.48■□□□□ 0.07
TRBV6-4A0A1B0GX49 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
TRBV6-4A0A1B0GX49 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-4A0A1B0GX49 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-4A0A1B0GX49 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRBV6-4A0A1B0GX49 AC092053.2-201ENST00000640557 1818 ntBASIC15.47■□□□□ 0.07
TRBV6-4A0A1B0GX49 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TRBV6-4A0A1B0GX49 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-4A0A1B0GX49 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRBV6-4A0A1B0GX49 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRBV6-4A0A1B0GX49 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-4A0A1B0GX49 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-4A0A1B0GX49 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-4A0A1B0GX49 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC15.47■□□□□ 0.07
TRBV6-4A0A1B0GX49 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC15.47■□□□□ 0.07
TRBV6-4A0A1B0GX49 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-4A0A1B0GX49 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRBV6-4A0A1B0GX49 SRD5A1P1-201ENST00000442297 786 ntBASIC15.47■□□□□ 0.07
TRBV6-4A0A1B0GX49 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-4A0A1B0GX49 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-4A0A1B0GX49 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC15.47■□□□□ 0.07
TRBV6-4A0A1B0GX49 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-4A0A1B0GX49 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-4A0A1B0GX49 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TRBV6-4A0A1B0GX49 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC15.47■□□□□ 0.07
TRBV6-4A0A1B0GX49 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRBV6-4A0A1B0GX49 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC15.47■□□□□ 0.07
TRBV6-4A0A1B0GX49 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
TRBV6-4A0A1B0GX49 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-4A0A1B0GX49 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-4A0A1B0GX49 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
TRBV6-4A0A1B0GX49 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC15.46■□□□□ 0.07
TRBV6-4A0A1B0GX49 GTSE1-AS1-202ENST00000623117 1518 ntBASIC15.46■□□□□ 0.07
TRBV6-4A0A1B0GX49 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRBV6-4A0A1B0GX49 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRBV6-4A0A1B0GX49 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
TRBV6-4A0A1B0GX49 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRBV6-4A0A1B0GX49 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC15.46■□□□□ 0.06
TRBV6-4A0A1B0GX49 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-4A0A1B0GX49 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
TRBV6-4A0A1B0GX49 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRBV6-4A0A1B0GX49 AL356441.2-201ENST00000443009 864 ntBASIC15.45■□□□□ 0.06
TRBV6-4A0A1B0GX49 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC15.45■□□□□ 0.06
TRBV6-4A0A1B0GX49 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
TRBV6-4A0A1B0GX49 AC099791.2-201ENST00000605725 427 ntBASIC15.45■□□□□ 0.06
TRBV6-4A0A1B0GX49 CA15P2-201ENST00000611168 834 ntBASIC15.45■□□□□ 0.06
TRBV6-4A0A1B0GX49 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-4A0A1B0GX49 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC15.45■□□□□ 0.06
TRBV6-4A0A1B0GX49 AC139530.1-201ENST00000575312 1977 ntBASIC15.45■□□□□ 0.06
TRBV6-4A0A1B0GX49 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRBV6-4A0A1B0GX49 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms