Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRBV6-1A0A0K0K1D8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV6-1A0A0K0K1D8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.46■□□□□ 0.23
TRBV6-1A0A0K0K1D8 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV6-1A0A0K0K1D8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TRBV6-1A0A0K0K1D8 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TRBV6-1A0A0K0K1D8 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TRBV6-1A0A0K0K1D8 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TRBV6-1A0A0K0K1D8 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV6-1A0A0K0K1D8 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.46■□□□□ 0.23
TRBV6-1A0A0K0K1D8 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.46■□□□□ 0.23
TRBV6-1A0A0K0K1D8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRBV6-1A0A0K0K1D8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
TRBV6-1A0A0K0K1D8 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-1A0A0K0K1D8 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-1A0A0K0K1D8 SLC25A24-204ENST00000569674 2357 ntBASIC16.45■□□□□ 0.22
TRBV6-1A0A0K0K1D8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.45■□□□□ 0.22
TRBV6-1A0A0K0K1D8 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-1A0A0K0K1D8 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-1A0A0K0K1D8 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-1A0A0K0K1D8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-1A0A0K0K1D8 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
TRBV6-1A0A0K0K1D8 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-1A0A0K0K1D8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-1A0A0K0K1D8 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-1A0A0K0K1D8 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-1A0A0K0K1D8 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-1A0A0K0K1D8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-1A0A0K0K1D8 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-1A0A0K0K1D8 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.45■□□□□ 0.22
TRBV6-1A0A0K0K1D8 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-1A0A0K0K1D8 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-1A0A0K0K1D8 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC16.45■□□□□ 0.22
TRBV6-1A0A0K0K1D8 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV6-1A0A0K0K1D8 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRBV6-1A0A0K0K1D8 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV6-1A0A0K0K1D8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV6-1A0A0K0K1D8 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.44■□□□□ 0.22
TRBV6-1A0A0K0K1D8 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
TRBV6-1A0A0K0K1D8 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.44■□□□□ 0.22
TRBV6-1A0A0K0K1D8 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TRBV6-1A0A0K0K1D8 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV6-1A0A0K0K1D8 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV6-1A0A0K0K1D8 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV6-1A0A0K0K1D8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
TRBV6-1A0A0K0K1D8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV6-1A0A0K0K1D8 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC16.44■□□□□ 0.22
TRBV6-1A0A0K0K1D8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.44■□□□□ 0.22
TRBV6-1A0A0K0K1D8 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV6-1A0A0K0K1D8 PKD1P6-201ENST00000343738 4769 ntBASIC16.44■□□□□ 0.22
TRBV6-1A0A0K0K1D8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV6-1A0A0K0K1D8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV6-1A0A0K0K1D8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV6-1A0A0K0K1D8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV6-1A0A0K0K1D8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
TRBV6-1A0A0K0K1D8 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV6-1A0A0K0K1D8 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC16.43■□□□□ 0.22
TRBV6-1A0A0K0K1D8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV6-1A0A0K0K1D8 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV6-1A0A0K0K1D8 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC16.43■□□□□ 0.22
TRBV6-1A0A0K0K1D8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV6-1A0A0K0K1D8 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV6-1A0A0K0K1D8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV6-1A0A0K0K1D8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC16.43■□□□□ 0.22
TRBV6-1A0A0K0K1D8 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV6-1A0A0K0K1D8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV6-1A0A0K0K1D8 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV6-1A0A0K0K1D8 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC16.43■□□□□ 0.22
TRBV6-1A0A0K0K1D8 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV6-1A0A0K0K1D8 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.42■□□□□ 0.22
TRBV6-1A0A0K0K1D8 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.42■□□□□ 0.22
TRBV6-1A0A0K0K1D8 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.42■□□□□ 0.22
TRBV6-1A0A0K0K1D8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV6-1A0A0K0K1D8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV6-1A0A0K0K1D8 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV6-1A0A0K0K1D8 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC16.42■□□□□ 0.22
TRBV6-1A0A0K0K1D8 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV6-1A0A0K0K1D8 DUX4L4-201ENST00000566884 1269 ntBASIC16.42■□□□□ 0.22
TRBV6-1A0A0K0K1D8 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC16.42■□□□□ 0.22
TRBV6-1A0A0K0K1D8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV6-1A0A0K0K1D8 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.42■□□□□ 0.22
TRBV6-1A0A0K0K1D8 AC005229.4-201ENST00000610085 2198 ntBASIC16.42■□□□□ 0.22
TRBV6-1A0A0K0K1D8 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV6-1A0A0K0K1D8 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC16.42■□□□□ 0.22
TRBV6-1A0A0K0K1D8 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV6-1A0A0K0K1D8 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV6-1A0A0K0K1D8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV6-1A0A0K0K1D8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV6-1A0A0K0K1D8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.41■□□□□ 0.22
TRBV6-1A0A0K0K1D8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRBV6-1A0A0K0K1D8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV6-1A0A0K0K1D8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC16.41■□□□□ 0.22
TRBV6-1A0A0K0K1D8 AC139795.1-202ENST00000500444 432 ntBASIC16.41■□□□□ 0.22
TRBV6-1A0A0K0K1D8 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRBV6-1A0A0K0K1D8 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV6-1A0A0K0K1D8 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
TRBV6-1A0A0K0K1D8 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC16.4■□□□□ 0.22
TRBV6-1A0A0K0K1D8 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC16.4■□□□□ 0.22
TRBV6-1A0A0K0K1D8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.4■□□□□ 0.22
TRBV6-1A0A0K0K1D8 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms