Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC15.73■□□□□ 0.11
TRGV4A0A0C4DH28 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRGV4A0A0C4DH28 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV4A0A0C4DH28 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV4A0A0C4DH28 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV4A0A0C4DH28 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV4A0A0C4DH28 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV4A0A0C4DH28 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV4A0A0C4DH28 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
TRGV4A0A0C4DH28 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV4A0A0C4DH28 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC15.72■□□□□ 0.11
TRGV4A0A0C4DH28 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC15.72■□□□□ 0.11
TRGV4A0A0C4DH28 C1orf229-201ENST00000623686 2258 ntBASIC15.72■□□□□ 0.11
TRGV4A0A0C4DH28 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV4A0A0C4DH28 AL356441.2-201ENST00000443009 864 ntBASIC15.72■□□□□ 0.11
TRGV4A0A0C4DH28 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC15.72■□□□□ 0.11
TRGV4A0A0C4DH28 DUX4L4-201ENST00000566884 1269 ntBASIC15.72■□□□□ 0.11
TRGV4A0A0C4DH28 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV4A0A0C4DH28 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC15.72■□□□□ 0.11
TRGV4A0A0C4DH28 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRGV4A0A0C4DH28 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV4A0A0C4DH28 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRGV4A0A0C4DH28 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TRGV4A0A0C4DH28 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV4A0A0C4DH28 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC15.72■□□□□ 0.11
TRGV4A0A0C4DH28 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC15.72■□□□□ 0.11
TRGV4A0A0C4DH28 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV4A0A0C4DH28 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC15.72■□□□□ 0.11
TRGV4A0A0C4DH28 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRGV4A0A0C4DH28 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC15.72■□□□□ 0.11
TRGV4A0A0C4DH28 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV4A0A0C4DH28 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC15.71■□□□□ 0.11
TRGV4A0A0C4DH28 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV4A0A0C4DH28 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV4A0A0C4DH28 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV4A0A0C4DH28 GALC-202ENST00000393568 2054 ntTSL 2 BASIC15.71■□□□□ 0.11
TRGV4A0A0C4DH28 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV4A0A0C4DH28 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV4A0A0C4DH28 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC15.71■□□□□ 0.11
TRGV4A0A0C4DH28 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC15.71■□□□□ 0.11
TRGV4A0A0C4DH28 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC15.71■□□□□ 0.11
TRGV4A0A0C4DH28 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRGV4A0A0C4DH28 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRGV4A0A0C4DH28 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
TRGV4A0A0C4DH28 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV4A0A0C4DH28 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV4A0A0C4DH28 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV4A0A0C4DH28 COMT-203ENST00000403184 2217 ntTSL 2 BASIC15.7■□□□□ 0.1
TRGV4A0A0C4DH28 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV4A0A0C4DH28 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV4A0A0C4DH28 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TRGV4A0A0C4DH28 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC15.7■□□□□ 0.1
TRGV4A0A0C4DH28 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV4A0A0C4DH28 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV4A0A0C4DH28 SRR-208ENST00000576848 588 ntTSL 4 BASIC15.7■□□□□ 0.1
TRGV4A0A0C4DH28 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC15.7■□□□□ 0.1
TRGV4A0A0C4DH28 AC241377.3-202ENST00000626088 1088 ntBASIC15.7■□□□□ 0.1
TRGV4A0A0C4DH28 AC241585.3-202ENST00000628937 1088 ntBASIC15.7■□□□□ 0.1
TRGV4A0A0C4DH28 AC245100.8-202ENST00000629247 1058 ntBASIC15.7■□□□□ 0.1
TRGV4A0A0C4DH28 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV4A0A0C4DH28 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC15.7■□□□□ 0.1
TRGV4A0A0C4DH28 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV4A0A0C4DH28 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRGV4A0A0C4DH28 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC15.7■□□□□ 0.1
TRGV4A0A0C4DH28 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.7■□□□□ 0.1
TRGV4A0A0C4DH28 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRGV4A0A0C4DH28 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC15.69■□□□□ 0.1
TRGV4A0A0C4DH28 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV4A0A0C4DH28 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV4A0A0C4DH28 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV4A0A0C4DH28 MIR3621-201ENST00000580529 85 ntBASIC15.69■□□□□ 0.1
TRGV4A0A0C4DH28 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC15.69■□□□□ 0.1
TRGV4A0A0C4DH28 AC233723.2-201ENST00000623798 2106 ntBASIC15.69■□□□□ 0.1
TRGV4A0A0C4DH28 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC15.69■□□□□ 0.1
TRGV4A0A0C4DH28 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV4A0A0C4DH28 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV4A0A0C4DH28 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC15.69■□□□□ 0.1
TRGV4A0A0C4DH28 GCA-201ENST00000233612 1694 ntTSL 2 BASIC15.69■□□□□ 0.1
TRGV4A0A0C4DH28 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRGV4A0A0C4DH28 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRGV4A0A0C4DH28 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC15.69■□□□□ 0.1
TRGV4A0A0C4DH28 VGF-203ENST00000611537 1622 ntTSL 5 BASIC15.68■□□□□ 0.1
TRGV4A0A0C4DH28 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV4A0A0C4DH28 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV4A0A0C4DH28 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV4A0A0C4DH28 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV4A0A0C4DH28 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV4A0A0C4DH28 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC15.68■□□□□ 0.1
TRGV4A0A0C4DH28 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRGV4A0A0C4DH28 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV4A0A0C4DH28 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV4A0A0C4DH28 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV4A0A0C4DH28 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRGV4A0A0C4DH28 SRD5A1P1-201ENST00000442297 786 ntBASIC15.68■□□□□ 0.1
TRGV4A0A0C4DH28 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV4A0A0C4DH28 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC15.68■□□□□ 0.1
TRGV4A0A0C4DH28 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TRGV4A0A0C4DH28 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TRGV4A0A0C4DH28 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRGV4A0A0C4DH28 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms