Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 MYT1-202ENST00000360149 2061 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
O00370 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
O00370 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
O00370 DNAI2-201ENST00000311014 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
O00370 FAS-204ENST00000355740 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
O00370 VPS26A-203ENST00000395098 2554 ntTSL 5 BASIC13.95□□□□□ -0.18
O00370 AHCYP7-201ENST00000560847 1308 ntBASIC13.95□□□□□ -0.18
O00370 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC13.95□□□□□ -0.18
O00370 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
O00370 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
O00370 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
O00370 SCRN1-207ENST00000434476 1454 ntTSL 2 BASIC13.95□□□□□ -0.18
O00370 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC13.95□□□□□ -0.18
O00370 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
O00370 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
O00370 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
O00370 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
O00370 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
O00370 HSD3BP1-201ENST00000286193 1111 ntBASIC13.95□□□□□ -0.18
O00370 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
O00370 COQ4-202ENST00000372875 928 ntTSL 2 BASIC13.95□□□□□ -0.18
O00370 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
O00370 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC13.95□□□□□ -0.18
O00370 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC13.95□□□□□ -0.18
O00370 IQCF4-203ENST00000428561 420 ntBASIC13.95□□□□□ -0.18
O00370 CPSF4-206ENST00000441580 942 ntTSL 2 BASIC13.95□□□□□ -0.18
O00370 VENTXP4-201ENST00000449029 958 ntBASIC13.95□□□□□ -0.18
O00370 AC063952.3-201ENST00000467756 308 ntBASIC13.95□□□□□ -0.18
O00370 DMKN-244ENST00000480502 820 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
O00370 RN7SL288P-201ENST00000490496 291 ntBASIC13.95□□□□□ -0.18
O00370 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC13.95□□□□□ -0.18
O00370 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC13.95□□□□□ -0.18
O00370 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC13.95□□□□□ -0.18
O00370 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC13.95□□□□□ -0.18
O00370 AC023968.2-201ENST00000560593 1049 ntBASIC13.95□□□□□ -0.18
O00370 KRT8P34-201ENST00000577607 1044 ntBASIC13.95□□□□□ -0.18
O00370 CYP2B7P-202ENST00000593298 1087 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
O00370 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC13.95□□□□□ -0.18
O00370 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
O00370 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
O00370 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC13.95□□□□□ -0.18
O00370 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
O00370 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
O00370 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
O00370 ZNF436-AS1-201ENST00000335648 2547 ntBASIC13.95□□□□□ -0.18
O00370 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC13.95□□□□□ -0.18
O00370 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC13.95□□□□□ -0.18
O00370 TRO-202ENST00000319167 2326 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
O00370 TRO-203ENST00000375022 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
O00370 DPH2-201ENST00000255108 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
O00370 PLA2G4E-AS1-201ENST00000499478 2499 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
O00370 TRIM39-RPP21-201ENST00000623385 1698 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
O00370 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
O00370 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
O00370 HYLS1-201ENST00000356438 1810 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
O00370 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
O00370 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
O00370 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
O00370 MSRA-202ENST00000382490 1460 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
O00370 USB1-207ENST00000563149 1751 ntTSL 2 BASIC13.94□□□□□ -0.18
O00370 PRTFDC1-201ENST00000320152 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
O00370 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
O00370 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC13.94□□□□□ -0.18
O00370 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
O00370 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
O00370 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
O00370 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
O00370 ALPL-203ENST00000374832 2193 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
O00370 PLXNA4-203ENST00000378539 2004 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
O00370 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
O00370 OR51A9P-201ENST00000422578 911 ntBASIC13.94□□□□□ -0.18
O00370 HNRNPA1P21-201ENST00000424115 961 ntBASIC13.94□□□□□ -0.18
O00370 KRT8P30-201ENST00000432100 650 ntBASIC13.94□□□□□ -0.18
O00370 AL118511.1-201ENST00000439341 794 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
O00370 CTCFL-211ENST00000502686 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
O00370 REEP5-205ENST00000504247 480 ntTSL 5 BASIC13.94□□□□□ -0.18
O00370 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC13.94□□□□□ -0.18
O00370 CYP11B1-204ENST00000517471 1874 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
O00370 TXNRD1-214ENST00000526691 3974 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
O00370 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
O00370 THY1-209ENST00000580275 578 ntTSL 3 BASIC13.94□□□□□ -0.18
O00370 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC13.94□□□□□ -0.18
O00370 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC13.94□□□□□ -0.18
O00370 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
O00370 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC13.94□□□□□ -0.18
O00370 CDK16-201ENST00000276052 3016 ntTSL 2 BASIC13.94□□□□□ -0.18
O00370 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
O00370 OAS1-201ENST00000202917 1816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
O00370 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
O00370 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
O00370 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
O00370 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.94□□□□□ -0.18
O00370 LPO-204ENST00000543544 2350 ntTSL 2 BASIC13.94□□□□□ -0.18
O00370 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
O00370 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC13.94□□□□□ -0.18
O00370 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
O00370 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
O00370 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
O00370 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
O00370 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms