Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
NPIPB4C9JG80 RAB43-203ENST00000393305 4215 ntAPPRIS P1 TSL 4 BASIC11.52□□□□□ -0.56
NPIPB4C9JG80 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 MB21D1-201ENST00000370315 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 MPP4-208ENST00000447335 2050 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 SEC22C-205ENST00000417572 1513 ntTSL 3 BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 FMR1-218ENST00000621447 1832 ntTSL 3 BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 OR4C46-201ENST00000328188 930 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 SLC25A6P1-201ENST00000412123 775 ntBASIC11.52□□□□□ -0.57
NPIPB4C9JG80 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 AC004522.1-201ENST00000419978 654 ntBASIC11.52□□□□□ -0.57
NPIPB4C9JG80 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 AC006059.1-201ENST00000438017 722 ntTSL 5 BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 PAXIP1-AS2-203ENST00000449486 2121 ntTSL 2 BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 RN7SL494P-201ENST00000461517 304 ntBASIC11.52□□□□□ -0.57
NPIPB4C9JG80 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 NPIPP1-202ENST00000534799 1214 ntTSL 3 BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 AC069503.1-201ENST00000538710 816 ntTSL 2 BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 AC138305.1-201ENST00000568932 561 ntTSL 5 BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 RN7SL605P-201ENST00000577229 281 ntBASIC11.52□□□□□ -0.57
NPIPB4C9JG80 KRT8P34-201ENST00000577607 1044 ntBASIC11.52□□□□□ -0.57
NPIPB4C9JG80 AP005264.6-204ENST00000588436 719 ntBASIC11.52□□□□□ -0.57
NPIPB4C9JG80 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 SPCS2P2-201ENST00000603270 608 ntBASIC11.52□□□□□ -0.57
NPIPB4C9JG80 PEBP1P2-201ENST00000603980 558 ntBASIC11.52□□□□□ -0.57
NPIPB4C9JG80 AP001065.2-201ENST00000617205 644 ntBASIC11.52□□□□□ -0.57
NPIPB4C9JG80 LINC01624-203ENST00000607074 3265 ntTSL 2 BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 FAM156A-203ENST00000611661 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 AC126564.1-201ENST00000623628 2013 ntBASIC11.52□□□□□ -0.57
NPIPB4C9JG80 NLRP7-202ENST00000340844 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 TRIM37-203ENST00000393066 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
NPIPB4C9JG80 ZNF684-203ENST00000372699 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 SETDB1-202ENST00000368962 1478 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 FAM86C2P-205ENST00000531806 1814 ntTSL 2 BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 MMP19-206ENST00000548629 1813 ntTSL 5 BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 SEC14L1-203ENST00000431431 2504 ntTSL 2 BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 CXorf40A-203ENST00000422892 1536 ntAPPRIS ALT1 TSL 2 BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 FP325330.2-201ENST00000624219 5630 ntBASIC11.51□□□□□ -0.57
NPIPB4C9JG80 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 CDK20-203ENST00000375871 1907 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 PYGL-206ENST00000544180 2696 ntTSL 2 BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 HSD3BP1-201ENST00000286193 1111 ntBASIC11.51□□□□□ -0.57
NPIPB4C9JG80 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 PIFO-201ENST00000369737 746 ntTSL 2 BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 CCL19-202ENST00000378800 414 ntTSL 2 BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 MYH9-202ENST00000401701 789 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 HLA-W-207ENST00000439514 771 ntBASIC11.51□□□□□ -0.57
NPIPB4C9JG80 BRI3P1-201ENST00000440440 378 ntBASIC11.51□□□□□ -0.57
NPIPB4C9JG80 AC010677.1-201ENST00000441690 412 ntBASIC11.51□□□□□ -0.57
NPIPB4C9JG80 AC009312.1-201ENST00000457110 592 ntTSL 4 BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 DLEU1-203ENST00000461527 917 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC11.51□□□□□ -0.57
NPIPB4C9JG80 RPL29P2-201ENST00000488409 460 ntBASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms