Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 SOX30-201ENST00000265007 3265 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLK1P49759 NLRP7-202ENST00000340844 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLK1P49759 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CLK1P49759 RFWD3-202ENST00000571750 3033 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CLK1P49759 RNF150-206ENST00000515673 9805 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CLK1P49759 CRHR1-206ENST00000398285 2399 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CLK1P49759 SPATA2-201ENST00000289431 4022 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLK1P49759 CTCFL-204ENST00000422869 2966 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CLK1P49759 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
CLK1P49759 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CLK1P49759 UGT1A5-201ENST00000373414 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLK1P49759 ZNF502-203ENST00000436624 2314 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CLK1P49759 ASPH-203ENST00000379454 5268 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLK1P49759 RHBDL3-201ENST00000269051 4661 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLK1P49759 ZNF555-203ENST00000591539 2270 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CLK1P49759 ODF2-213ENST00000448249 2059 ntTSL 2 BASIC12.43□□□□□ -0.42
CLK1P49759 MARCH8-204ENST00000453424 5638 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CLK1P49759 CYP11B1-204ENST00000517471 1874 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CLK1P49759 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC12.43□□□□□ -0.42
CLK1P49759 ZFAT-202ENST00000429442 4421 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CLK1P49759 TNS2-204ENST00000546602 4429 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CLK1P49759 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
CLK1P49759 AL512430.1-201ENST00000392575 860 ntBASIC12.43□□□□□ -0.42
CLK1P49759 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CLK1P49759 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
CLK1P49759 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC12.43□□□□□ -0.42
CLK1P49759 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC12.43□□□□□ -0.42
CLK1P49759 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC12.43□□□□□ -0.42
CLK1P49759 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC12.43□□□□□ -0.42
CLK1P49759 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CLK1P49759 EEF1DP6-201ENST00000449232 372 ntBASIC12.43□□□□□ -0.42
CLK1P49759 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CLK1P49759 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC12.43□□□□□ -0.42
CLK1P49759 RN7SL564P-201ENST00000496309 250 ntBASIC12.43□□□□□ -0.42
CLK1P49759 MRPL22P1-201ENST00000505398 616 ntBASIC12.43□□□□□ -0.42
CLK1P49759 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC12.43□□□□□ -0.42
CLK1P49759 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC12.43□□□□□ -0.42
CLK1P49759 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLK1P49759 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC12.43□□□□□ -0.42
CLK1P49759 MT3-203ENST00000565838 421 ntTSL 3 BASIC12.43□□□□□ -0.42
CLK1P49759 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC12.43□□□□□ -0.42
CLK1P49759 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CLK1P49759 AP000322.3-201ENST00000608665 388 ntBASIC12.43□□□□□ -0.42
CLK1P49759 AC007250.1-201ENST00000608934 338 ntBASIC12.43□□□□□ -0.42
CLK1P49759 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC12.43□□□□□ -0.42
CLK1P49759 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC12.43□□□□□ -0.42
CLK1P49759 MIGA2-201ENST00000358369 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLK1P49759 SZRD1-201ENST00000401088 3636 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLK1P49759 FGF23-201ENST00000237837 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLK1P49759 AC009084.2-201ENST00000624046 2810 ntBASIC12.43□□□□□ -0.42
CLK1P49759 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLK1P49759 LINC01106-201ENST00000436665 2244 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CLK1P49759 MYO18B-201ENST00000335473 8565 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLK1P49759 WASF2-202ENST00000618852 5676 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLK1P49759 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLK1P49759 FAN1-201ENST00000362065 4891 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLK1P49759 GALNT6-202ENST00000543196 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLK1P49759 FAM177A1-201ENST00000280987 2927 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLK1P49759 ZNF341-201ENST00000342427 3661 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLK1P49759 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC12.43□□□□□ -0.42
CLK1P49759 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC12.43□□□□□ -0.42
CLK1P49759 AC026797.1-201ENST00000624837 2869 ntBASIC12.43□□□□□ -0.42
CLK1P49759 ZFR-201ENST00000265069 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLK1P49759 APEH-201ENST00000296456 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CLK1P49759 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC12.43□□□□□ -0.42
CLK1P49759 CCDC88A-207ENST00000436346 9811 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CLK1P49759 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CLK1P49759 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CLK1P49759 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC12.42□□□□□ -0.42
CLK1P49759 AL592287.1-201ENST00000637598 2074 ntTSL 5 BASIC12.42□□□□□ -0.42
CLK1P49759 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC12.42□□□□□ -0.42
CLK1P49759 NFE2L1-222ENST00000585291 4390 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CLK1P49759 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLK1P49759 GREB1-204ENST00000381486 8484 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CLK1P49759 HDAC2-205ENST00000519065 9874 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLK1P49759 PNPLA6-220ENST00000600737 4195 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CLK1P49759 OTUD6B-201ENST00000285420 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLK1P49759 AIF1L-204ENST00000372300 3284 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CLK1P49759 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CLK1P49759 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLK1P49759 PHLPP2-204ENST00000567016 4812 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CLK1P49759 RGPD8-203ENST00000409750 5544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLK1P49759 MARCH5-201ENST00000358935 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLK1P49759 NLGN3-202ENST00000374051 3913 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CLK1P49759 ZCRB1-201ENST00000266529 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLK1P49759 MOG-225ENST00000431798 1814 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CLK1P49759 SCRN1-207ENST00000434476 1454 ntTSL 2 BASIC12.42□□□□□ -0.42
CLK1P49759 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
CLK1P49759 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CLK1P49759 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC12.42□□□□□ -0.42
CLK1P49759 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC12.42□□□□□ -0.42
CLK1P49759 ZNF286A-203ENST00000421016 5541 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CLK1P49759 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CLK1P49759 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC12.42□□□□□ -0.42
CLK1P49759 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC12.42□□□□□ -0.42
CLK1P49759 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CLK1P49759 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC12.42□□□□□ -0.42
CLK1P49759 AC105129.2-201ENST00000559536 390 ntBASIC12.42□□□□□ -0.42
CLK1P49759 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CLK1P49759 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 152.6 ms