Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
MTHFRP42898 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.67□□□□□ -0.22
MTHFRP42898 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MTHFRP42898 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
MTHFRP42898 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
MTHFRP42898 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
MTHFRP42898 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MTHFRP42898 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.67□□□□□ -0.22
MTHFRP42898 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MTHFRP42898 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MTHFRP42898 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
MTHFRP42898 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.67□□□□□ -0.22
MTHFRP42898 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MTHFRP42898 CR769775.1-203ENST00000399894 579 ntTSL 3 BASIC13.67□□□□□ -0.22
MTHFRP42898 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC13.67□□□□□ -0.22
MTHFRP42898 FPGT-205ENST00000482102 561 ntTSL 4 BASIC13.67□□□□□ -0.22
MTHFRP42898 RN7SL76P-201ENST00000482435 289 ntBASIC13.67□□□□□ -0.22
MTHFRP42898 NUP210P2-201ENST00000510577 282 ntBASIC13.67□□□□□ -0.22
MTHFRP42898 ST3GAL1P1-201ENST00000513810 1014 ntBASIC13.67□□□□□ -0.22
MTHFRP42898 WISP1-205ENST00000519433 545 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
MTHFRP42898 JPT2-214ENST00000569765 782 ntTSL 2 BASIC13.67□□□□□ -0.22
MTHFRP42898 MRPL34-206ENST00000602206 603 ntTSL 3 BASIC13.67□□□□□ -0.22
MTHFRP42898 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
MTHFRP42898 AC009118.3-201ENST00000622896 873 ntBASIC13.67□□□□□ -0.22
MTHFRP42898 AC135506.1-201ENST00000603877 1799 ntBASIC13.67□□□□□ -0.22
MTHFRP42898 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
MTHFRP42898 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
MTHFRP42898 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MTHFRP42898 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC13.67□□□□□ -0.22
MTHFRP42898 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
MTHFRP42898 AC135782.3-201ENST00000562782 2105 ntBASIC13.67□□□□□ -0.22
MTHFRP42898 MAFTRR-201ENST00000562921 1859 ntTSL 5 BASIC13.67□□□□□ -0.22
MTHFRP42898 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MTHFRP42898 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MTHFRP42898 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC13.67□□□□□ -0.22
MTHFRP42898 CD1A-201ENST00000289429 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MTHFRP42898 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MTHFRP42898 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MTHFRP42898 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
MTHFRP42898 GMPR2-224ENST00000559910 1562 ntTSL 5 BASIC13.66□□□□□ -0.22
MTHFRP42898 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
MTHFRP42898 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
MTHFRP42898 AZGP1-201ENST00000292401 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MTHFRP42898 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
MTHFRP42898 VOPP1-204ENST00000418904 1317 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MTHFRP42898 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MTHFRP42898 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MTHFRP42898 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
MTHFRP42898 AL512488.1-201ENST00000433544 1671 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MTHFRP42898 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
MTHFRP42898 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MTHFRP42898 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
MTHFRP42898 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.66□□□□□ -0.22
MTHFRP42898 PCDHB18P-202ENST00000526308 3197 ntBASIC13.66□□□□□ -0.22
MTHFRP42898 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MTHFRP42898 STMN1-206ENST00000455785 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MTHFRP42898 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MTHFRP42898 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
MTHFRP42898 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
MTHFRP42898 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.66□□□□□ -0.22
MTHFRP42898 TBC1D21-201ENST00000300504 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MTHFRP42898 HIGD2B-201ENST00000311755 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MTHFRP42898 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
MTHFRP42898 POLR3DP1-201ENST00000398689 1176 ntBASIC13.66□□□□□ -0.22
MTHFRP42898 LIMS2-203ENST00000409254 867 ntTSL 3 BASIC13.66□□□□□ -0.22
MTHFRP42898 AC234771.1-201ENST00000416873 250 ntTSL 2 BASIC13.66□□□□□ -0.22
MTHFRP42898 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC13.66□□□□□ -0.22
MTHFRP42898 RN7SL87P-201ENST00000497657 288 ntBASIC13.66□□□□□ -0.22
MTHFRP42898 DERL1-204ENST00000519018 575 ntTSL 4 BASIC13.66□□□□□ -0.22
MTHFRP42898 AL391832.3-201ENST00000549744 846 ntTSL 3 BASIC13.66□□□□□ -0.22
MTHFRP42898 SNHG21-205ENST00000561107 790 ntTSL 2 BASIC13.66□□□□□ -0.22
MTHFRP42898 IGHV3OR16-11-201ENST00000565524 349 ntBASIC13.66□□□□□ -0.22
MTHFRP42898 AC007608.2-201ENST00000569940 1146 ntTSL 3 BASIC13.66□□□□□ -0.22
MTHFRP42898 MIR4763-201ENST00000581461 92 ntBASIC13.66□□□□□ -0.22
MTHFRP42898 AP005264.6-203ENST00000586882 1050 ntTSL 5 BASIC13.66□□□□□ -0.22
MTHFRP42898 AC091736.1-201ENST00000609370 305 ntBASIC13.66□□□□□ -0.22
MTHFRP42898 AL591926.3-201ENST00000611630 238 ntBASIC13.66□□□□□ -0.22
MTHFRP42898 AL158032.2-201ENST00000616818 195 ntBASIC13.66□□□□□ -0.22
MTHFRP42898 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC13.66□□□□□ -0.22
MTHFRP42898 RBP1-206ENST00000617459 667 ntTSL 2 BASIC13.66□□□□□ -0.22
MTHFRP42898 LINC02340-202ENST00000620494 573 ntTSL 4 BASIC13.66□□□□□ -0.22
MTHFRP42898 AC020763.2-201ENST00000623155 1255 ntBASIC13.66□□□□□ -0.22
MTHFRP42898 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
MTHFRP42898 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MTHFRP42898 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MTHFRP42898 ASGR2-201ENST00000254850 1396 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
MTHFRP42898 ASGR2-202ENST00000355035 1386 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
MTHFRP42898 BSDC1-209ENST00000526031 1361 ntTSL 2 BASIC13.66□□□□□ -0.22
MTHFRP42898 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
MTHFRP42898 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
MTHFRP42898 AC020914.1-201ENST00000396477 1476 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
MTHFRP42898 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MTHFRP42898 POLR2J2-203ENST00000476151 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MTHFRP42898 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
MTHFRP42898 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
MTHFRP42898 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MTHFRP42898 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
MTHFRP42898 ITGB1BP1-201ENST00000238091 1772 ntTSL 3 BASIC13.66□□□□□ -0.22
MTHFRP42898 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
MTHFRP42898 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms