Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 PLEKHA5-203ENST00000429027 4762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 ZSCAN5DP-201ENST00000600684 1488 ntBASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 MKRN7P-201ENST00000433469 1371 ntBASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 TPI1P3-201ENST00000335020 740 ntBASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 RPSAP6-201ENST00000417882 882 ntBASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 DPY19L2P4-201ENST00000479881 442 ntBASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 GYG1-209ENST00000483267 801 ntTSL 2 BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 AC233724.9-201ENST00000511694 407 ntBASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 ACY3-202ENST00000529256 933 ntTSL 3 BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 EMC4-208ENST00000559078 599 ntTSL 3 BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 AP002761.4-201ENST00000565433 3361 ntBASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
NPIPA3F8WFD2 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 ZNF701-204ENST00000540331 5538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 RNF150-206ENST00000515673 9805 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 MIR324-201ENST00000362183 83 ntBASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 FDPSP7-201ENST00000429043 1054 ntBASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 GAPDHP29-201ENST00000429913 985 ntBASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 AC092865.2-201ENST00000439409 971 ntBASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 AL773545.2-201ENST00000442149 472 ntBASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 AL357140.1-201ENST00000454104 424 ntTSL 2 BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 CXXC1P1-202ENST00000489409 1212 ntBASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 AC092656.1-202ENST00000515843 998 ntTSL 4 BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 CCND3P2-201ENST00000579393 537 ntBASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 AC211476.2-201ENST00000608799 708 ntBASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 AC008622.3-201ENST00000621170 600 ntBASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
NPIPA3F8WFD2 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms