Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 IGHVII-74-1-201ENST00000517572 241 ntBASIC11.54□□□□□ -0.56
NPIPB4C9JG80 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC11.54□□□□□ -0.56
NPIPB4C9JG80 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
NPIPB4C9JG80 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC11.54□□□□□ -0.56
NPIPB4C9JG80 AC020897.1-201ENST00000587702 561 ntTSL 4 BASIC11.54□□□□□ -0.56
NPIPB4C9JG80 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
NPIPB4C9JG80 AP000769.1-203ENST00000637245 208 ntBASIC11.54□□□□□ -0.56
NPIPB4C9JG80 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
NPIPB4C9JG80 KRT8P15-201ENST00000425226 1451 ntBASIC11.54□□□□□ -0.56
NPIPB4C9JG80 CYP2B7P-201ENST00000541697 1476 ntBASIC11.54□□□□□ -0.56
NPIPB4C9JG80 SHANK2-AS3-201ENST00000307548 1683 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
NPIPB4C9JG80 CYP4F12-201ENST00000324632 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NPIPB4C9JG80 HOPX-211ENST00000554144 1672 ntTSL 5 BASIC11.54□□□□□ -0.56
NPIPB4C9JG80 HIST1H2BH-201ENST00000619466 2060 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
NPIPB4C9JG80 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC11.54□□□□□ -0.56
NPIPB4C9JG80 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC11.54□□□□□ -0.56
NPIPB4C9JG80 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NPIPB4C9JG80 ALDH1A2-204ENST00000537372 3700 ntTSL 2 BASIC11.54□□□□□ -0.56
NPIPB4C9JG80 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC11.54□□□□□ -0.56
NPIPB4C9JG80 RUBCN-202ENST00000296343 2919 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
NPIPB4C9JG80 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NPIPB4C9JG80 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
NPIPB4C9JG80 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NPIPB4C9JG80 DERL1-202ENST00000405944 1994 ntTSL 2 BASIC11.54□□□□□ -0.56
NPIPB4C9JG80 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
NPIPB4C9JG80 FMR1-220ENST00000621987 1352 ntTSL 5 BASIC11.54□□□□□ -0.56
NPIPB4C9JG80 OR13A1-202ENST00000536058 2023 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 PTCD2-212ENST00000543322 2029 ntTSL 2 BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 SNAP25-202ENST00000304886 2050 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 C3orf36-201ENST00000408895 1668 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 CRHR1-206ENST00000398285 2399 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 RIPK3-201ENST00000216274 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 PCLAF-201ENST00000300035 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 FAM76A-202ENST00000234549 992 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 MARCKSL1P2-201ENST00000401037 976 ntBASIC11.53□□□□□ -0.56
NPIPB4C9JG80 TEDDM2P-201ENST00000414169 786 ntBASIC11.53□□□□□ -0.56
NPIPB4C9JG80 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 IFNWP2-201ENST00000431203 580 ntBASIC11.53□□□□□ -0.56
NPIPB4C9JG80 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 KRT8P30-201ENST00000432100 650 ntBASIC11.53□□□□□ -0.56
NPIPB4C9JG80 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 KRT18P46-201ENST00000435568 1279 ntBASIC11.53□□□□□ -0.56
NPIPB4C9JG80 COL18A1-AS2-201ENST00000446475 552 ntTSL 4 BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 PRKRIP1-202ENST00000462601 884 ntTSL 2 BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 KRT18P63-201ENST00000505463 979 ntBASIC11.53□□□□□ -0.56
NPIPB4C9JG80 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 GNGT2-204ENST00000511277 918 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 FAM76A-207ENST00000530324 1027 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 MIR4706-201ENST00000582134 82 ntBASIC11.53□□□□□ -0.56
NPIPB4C9JG80 AL160191.2-201ENST00000603975 601 ntBASIC11.53□□□□□ -0.56
NPIPB4C9JG80 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 AC068987.3-201ENST00000637934 1195 ntTSL 5 BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 AC016831.5-201ENST00000605249 1998 ntBASIC11.53□□□□□ -0.56
NPIPB4C9JG80 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 GIMAP6-201ENST00000328902 3440 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 EPHB6-211ENST00000619012 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 GRB10-202ENST00000357271 2050 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 GREM2-201ENST00000318160 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
NPIPB4C9JG80 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
NPIPB4C9JG80 PVT1-203ENST00000513868 1699 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
NPIPB4C9JG80 PAX6-201ENST00000241001 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
NPIPB4C9JG80 CHRDL2-201ENST00000263671 1712 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
NPIPB4C9JG80 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC11.52□□□□□ -0.56
NPIPB4C9JG80 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
NPIPB4C9JG80 IRF5-208ENST00000473745 2282 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
NPIPB4C9JG80 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
NPIPB4C9JG80 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms