Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
NPIPB4C9JG80 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
NPIPB4C9JG80 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
NPIPB4C9JG80 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
NPIPB4C9JG80 AC145098.2-201ENST00000623593 3026 ntBASIC11.57□□□□□ -0.56
NPIPB4C9JG80 TRO-202ENST00000319167 2326 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
NPIPB4C9JG80 TRO-203ENST00000375022 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
NPIPB4C9JG80 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 KRT40-202ENST00000398486 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 AL109809.1-201ENST00000418979 1367 ntBASIC11.56□□□□□ -0.56
NPIPB4C9JG80 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 THSD1-201ENST00000258613 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 AC053503.6-201ENST00000623864 1843 ntBASIC11.56□□□□□ -0.56
NPIPB4C9JG80 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 C9orf3-201ENST00000277198 1966 ntTSL 2 BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 ARHGEF9-205ENST00000437457 3758 ntTSL 5 BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 LINC00910-201ENST00000341011 2303 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 CAMK2B-202ENST00000346990 1448 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 DDX56-204ENST00000431640 1554 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 RBMXP2-201ENST00000434705 1168 ntBASIC11.56□□□□□ -0.56
NPIPB4C9JG80 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 TMUB2-203ENST00000446571 1580 ntTSL 2 BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 AL135901.1-201ENST00000451812 333 ntBASIC11.56□□□□□ -0.56
NPIPB4C9JG80 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 AC008267.1-201ENST00000474858 1069 ntBASIC11.56□□□□□ -0.56
NPIPB4C9JG80 RN7SL147P-201ENST00000487345 298 ntBASIC11.56□□□□□ -0.56
NPIPB4C9JG80 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 HNRNPA1P4-201ENST00000509706 756 ntBASIC11.56□□□□□ -0.56
NPIPB4C9JG80 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 AC022211.3-201ENST00000584339 400 ntTSL 3 BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 AC100793.3-201ENST00000592440 719 ntTSL 2 BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 NOSIP-204ENST00000596358 1005 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 GMFG-209ENST00000600322 622 ntTSL 5 BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 LINC00694-204ENST00000637612 1059 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 AL357509.1-201ENST00000641892 2013 ntBASIC11.56□□□□□ -0.56
NPIPB4C9JG80 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 AP001046.1-201ENST00000435702 2816 ntTSL 2 BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 UEVLD-213ENST00000543987 2503 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 SHOC2-202ENST00000369452 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 PES1-205ENST00000405677 2708 ntTSL 2 BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 MIR193BHG-211ENST00000641433 5365 ntBASIC11.56□□□□□ -0.56
NPIPB4C9JG80 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 CEACAM20-206ENST00000621342 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 APOBEC3B-203ENST00000402182 1844 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
NPIPB4C9JG80 ELMOD3-202ENST00000393852 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NPIPB4C9JG80 AL122018.1-201ENST00000446607 2310 ntBASIC11.55□□□□□ -0.56
NPIPB4C9JG80 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC11.55□□□□□ -0.56
NPIPB4C9JG80 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
NPIPB4C9JG80 FAM90A6P-201ENST00000515148 1394 ntBASIC11.55□□□□□ -0.56
NPIPB4C9JG80 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NPIPB4C9JG80 AC092028.1-202ENST00000641483 3547 ntBASIC11.55□□□□□ -0.56
NPIPB4C9JG80 AC092028.1-201ENST00000641781 3540 ntBASIC11.55□□□□□ -0.56
NPIPB4C9JG80 CTNS-201ENST00000046640 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NPIPB4C9JG80 LINC00908-202ENST00000578613 2242 ntTSL 2 BASIC11.55□□□□□ -0.56
NPIPB4C9JG80 AP003063.2-201ENST00000525984 2067 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
NPIPB4C9JG80 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
NPIPB4C9JG80 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NPIPB4C9JG80 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NPIPB4C9JG80 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
NPIPB4C9JG80 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC11.55□□□□□ -0.56
NPIPB4C9JG80 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
NPIPB4C9JG80 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms