Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NCDNQ9UBB6 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
NCDNQ9UBB6 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NCDNQ9UBB6 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NCDNQ9UBB6 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NCDNQ9UBB6 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
NCDNQ9UBB6 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
NCDNQ9UBB6 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NCDNQ9UBB6 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NCDNQ9UBB6 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NCDNQ9UBB6 SIRPG-205ENST00000381583 1383 ntTSL 5 BASIC13.04□□□□□ -0.32
NCDNQ9UBB6 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
NCDNQ9UBB6 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NCDNQ9UBB6 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NCDNQ9UBB6 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NCDNQ9UBB6 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.04□□□□□ -0.32
NCDNQ9UBB6 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
NCDNQ9UBB6 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
NCDNQ9UBB6 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 RNF125-201ENST00000217740 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 BTN2A2-204ENST00000432533 1570 ntTSL 2 BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 FMO6P-201ENST00000236166 1620 ntBASIC13.03□□□□□ -0.32
NCDNQ9UBB6 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 KIR3DL3-201ENST00000291860 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 AL157996.1-201ENST00000624684 2299 ntBASIC13.03□□□□□ -0.32
NCDNQ9UBB6 TIMP1-201ENST00000218388 892 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 NHP2-201ENST00000274606 865 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 PRY-201ENST00000303728 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 PRY2-201ENST00000303804 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 OAZ3-201ENST00000321531 851 ntTSL 5 BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 PRYP3-201ENST00000343584 1063 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 TIMP1-202ENST00000377017 626 ntTSL 2 BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 LINC00685-201ENST00000391707 428 ntTSL 5 BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 AC069277.1-201ENST00000433639 1083 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 MAP1LC3BP1-202ENST00000438342 516 ntTSL 3 BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 AC002066.1-201ENST00000446355 514 ntTSL 5 BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 TGFA-207ENST00000450929 950 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 LINC01297-202ENST00000453395 624 ntTSL 5 BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 PFN1P10-201ENST00000455962 327 ntBASIC13.03□□□□□ -0.32
NCDNQ9UBB6 RPSAP5-201ENST00000485258 884 ntBASIC13.03□□□□□ -0.32
NCDNQ9UBB6 AC139795.1-201ENST00000499314 838 ntTSL 5 BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 FAM153C-208ENST00000511189 926 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 AC104117.1-201ENST00000517817 900 ntBASIC13.03□□□□□ -0.32
NCDNQ9UBB6 ATP2A2-211ENST00000552636 529 ntTSL 4 BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 ALOX12P1-201ENST00000579299 1229 ntBASIC13.03□□□□□ -0.32
NCDNQ9UBB6 ZNF223-202ENST00000585552 541 ntTSL 4 BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 AC108673.2-201ENST00000608909 565 ntBASIC13.03□□□□□ -0.32
NCDNQ9UBB6 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 FAM90A27P-201ENST00000593323 1370 ntBASIC13.03□□□□□ -0.32
NCDNQ9UBB6 FAM90A28P-202ENST00000597191 1374 ntBASIC13.03□□□□□ -0.32
NCDNQ9UBB6 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 GAS6-AS2-201ENST00000608651 1952 ntTSL 2 BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 ST3GAL3-202ENST00000330208 1479 ntTSL 5 BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NCDNQ9UBB6 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
NCDNQ9UBB6 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC13.02□□□□□ -0.32
NCDNQ9UBB6 LINC00910-201ENST00000341011 2303 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
NCDNQ9UBB6 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
NCDNQ9UBB6 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
NCDNQ9UBB6 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
NCDNQ9UBB6 AGAP10P-201ENST00000454844 2418 ntBASIC13.02□□□□□ -0.32
NCDNQ9UBB6 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
NCDNQ9UBB6 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NCDNQ9UBB6 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NCDNQ9UBB6 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
NCDNQ9UBB6 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.02□□□□□ -0.33
NCDNQ9UBB6 ANAPC15-201ENST00000227618 886 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
NCDNQ9UBB6 SUGT1-202ENST00000343788 1217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
NCDNQ9UBB6 FATE1-201ENST00000370350 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NCDNQ9UBB6 FTH1P19-201ENST00000402402 528 ntBASIC13.02□□□□□ -0.33
NCDNQ9UBB6 TACR1-202ENST00000409848 1270 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NCDNQ9UBB6 ZNF662-202ENST00000422021 436 ntTSL 2 BASIC13.02□□□□□ -0.33
NCDNQ9UBB6 AP000346.2-202ENST00000425948 383 ntBASIC13.02□□□□□ -0.33
NCDNQ9UBB6 AC006987.4-201ENST00000430032 279 ntBASIC13.02□□□□□ -0.33
NCDNQ9UBB6 AK2-208ENST00000487289 920 ntTSL 2 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms