Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 EPS15L1-201ENST00000248070 2924 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 CXorf40A-203ENST00000422892 1536 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 CHEK1-203ENST00000428830 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 MKL1-213ENST00000620651 3757 ntTSL 5 BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 GPATCH2L-212ENST00000557263 1458 ntTSL 2 BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 AGA-201ENST00000264595 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 PCGF2-204ENST00000616199 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 CEACAM20-201ENST00000611497 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LMO3Q8TAP4 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 CHRDL2-201ENST00000263671 1712 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 AC025271.4-201ENST00000621477 1726 ntBASIC13.98□□□□□ -0.17
LMO3Q8TAP4 PTCD2-212ENST00000543322 2029 ntTSL 2 BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 LINC00910-201ENST00000341011 2303 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 ZNF287-202ENST00000395825 3208 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 IP6K2-221ENST00000449610 1673 ntTSL 2 BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 AC009549.1-201ENST00000603468 1686 ntBASIC13.98□□□□□ -0.17
LMO3Q8TAP4 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 LSM8-201ENST00000249299 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 CTAGE7P-201ENST00000435712 2436 ntBASIC13.98□□□□□ -0.17
LMO3Q8TAP4 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 AC005822.1-201ENST00000414124 1034 ntBASIC13.98□□□□□ -0.17
LMO3Q8TAP4 RPSAP6-201ENST00000417882 882 ntBASIC13.98□□□□□ -0.17
LMO3Q8TAP4 IGHV3-74-201ENST00000424969 587 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 AC002451.1-202ENST00000432265 771 ntTSL 2 BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 RPL3P5-201ENST00000441645 1232 ntBASIC13.98□□□□□ -0.17
LMO3Q8TAP4 AC133141.1-201ENST00000443015 339 ntBASIC13.98□□□□□ -0.17
LMO3Q8TAP4 VPS33A-202ENST00000451053 1154 ntTSL 3 BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 AC034102.3-201ENST00000551846 300 ntTSL 3 BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 MIR7845-201ENST00000618396 99 ntBASIC13.98□□□□□ -0.17
LMO3Q8TAP4 CEACAM20-206ENST00000621342 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 AC117500.5-201ENST00000623233 527 ntBASIC13.98□□□□□ -0.17
LMO3Q8TAP4 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 LDLR-207ENST00000558013 3144 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 ZNF436-AS1-201ENST00000335648 2547 ntBASIC13.98□□□□□ -0.17
LMO3Q8TAP4 CPSF6-201ENST00000266679 2229 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 CYLD-214ENST00000569418 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 BORA-202ENST00000377815 1673 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LMO3Q8TAP4 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LMO3Q8TAP4 HIF3A-204ENST00000300862 2551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LMO3Q8TAP4 GRB10-202ENST00000357271 2050 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LMO3Q8TAP4 UBTF-206ENST00000527034 3010 ntTSL 5 BASIC13.97□□□□□ -0.17
LMO3Q8TAP4 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
LMO3Q8TAP4 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LMO3Q8TAP4 PARGP1-201ENST00000417555 2286 ntBASIC13.97□□□□□ -0.17
LMO3Q8TAP4 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LMO3Q8TAP4 LINC02202-201ENST00000499583 2664 ntTSL 2 BASIC13.97□□□□□ -0.17
LMO3Q8TAP4 PHB-214ENST00000614445 1952 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LMO3Q8TAP4 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LMO3Q8TAP4 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
LMO3Q8TAP4 VSTM1-202ENST00000366170 654 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LMO3Q8TAP4 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
LMO3Q8TAP4 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LMO3Q8TAP4 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC13.97□□□□□ -0.17
LMO3Q8TAP4 AC010677.1-201ENST00000441690 412 ntBASIC13.97□□□□□ -0.17
LMO3Q8TAP4 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC13.97□□□□□ -0.17
LMO3Q8TAP4 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC13.97□□□□□ -0.17
LMO3Q8TAP4 AC010632.2-201ENST00000588369 1224 ntBASIC13.97□□□□□ -0.17
LMO3Q8TAP4 BX322534.1-201ENST00000635574 241 ntBASIC13.97□□□□□ -0.17
LMO3Q8TAP4 AC215524.1-201ENST00000635696 241 ntBASIC13.97□□□□□ -0.17
LMO3Q8TAP4 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC13.97□□□□□ -0.17
LMO3Q8TAP4 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC13.97□□□□□ -0.17
LMO3Q8TAP4 GALNT15-203ENST00000437509 2416 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LMO3Q8TAP4 TRIM37-202ENST00000393065 3548 ntTSL 2 BASIC13.97□□□□□ -0.17
LMO3Q8TAP4 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
LMO3Q8TAP4 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LMO3Q8TAP4 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LMO3Q8TAP4 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LMO3Q8TAP4 AL512378.1-201ENST00000394808 2100 ntBASIC13.97□□□□□ -0.17
LMO3Q8TAP4 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
LMO3Q8TAP4 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms