Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC226150.1-201ENST00000544259 466 ntBASIC13.81□□□□□ -0.2
SLC1A1P43005 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13.81□□□□□ -0.2
SLC1A1P43005 AL359219.1-201ENST00000556311 934 ntBASIC13.81□□□□□ -0.2
SLC1A1P43005 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SLC1A1P43005 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC13.81□□□□□ -0.2
SLC1A1P43005 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC13.81□□□□□ -0.2
SLC1A1P43005 AC011247.3-201ENST00000603297 438 ntBASIC13.81□□□□□ -0.2
SLC1A1P43005 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC13.81□□□□□ -0.2
SLC1A1P43005 ESR2-213ENST00000557772 5458 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SLC1A1P43005 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13.81□□□□□ -0.2
SLC1A1P43005 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SLC1A1P43005 ZNF701-204ENST00000540331 5538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC1A1P43005 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC1A1P43005 FLJ30679-201ENST00000624773 1980 ntBASIC13.81□□□□□ -0.2
SLC1A1P43005 SERINC4-201ENST00000299969 2318 ntTSL 5 BASIC13.81□□□□□ -0.2
SLC1A1P43005 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC1A1P43005 VOPP1-206ENST00000428097 1671 ntTSL 3 BASIC13.81□□□□□ -0.2
SLC1A1P43005 AC243964.3-201ENST00000623022 2028 ntBASIC13.81□□□□□ -0.2
SLC1A1P43005 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC1A1P43005 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SLC1A1P43005 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC1A1P43005 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SLC1A1P43005 FUCA1P1-201ENST00000374476 1351 ntBASIC13.81□□□□□ -0.2
SLC1A1P43005 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC1A1P43005 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
SLC1A1P43005 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC1A1P43005 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
SLC1A1P43005 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SLC1A1P43005 AC131902.2-201ENST00000566892 2172 ntBASIC13.81□□□□□ -0.2
SLC1A1P43005 HYLS1-201ENST00000356438 1810 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SLC1A1P43005 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SLC1A1P43005 PPP1R32-203ENST00000432063 1472 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A1P43005 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SLC1A1P43005 GPATCH2L-212ENST00000557263 1458 ntTSL 2 BASIC13.8□□□□□ -0.2
SLC1A1P43005 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A1P43005 SPTLC1-201ENST00000262554 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A1P43005 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
SLC1A1P43005 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
SLC1A1P43005 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A1P43005 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A1P43005 ITPRIP-202ENST00000337478 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A1P43005 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A1P43005 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC13.8□□□□□ -0.2
SLC1A1P43005 LINC00523-206ENST00000556697 2071 ntTSL 2 BASIC13.8□□□□□ -0.2
SLC1A1P43005 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A1P43005 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A1P43005 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A1P43005 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC13.8□□□□□ -0.2
SLC1A1P43005 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A1P43005 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A1P43005 CD74-203ENST00000377795 1138 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A1P43005 Z69890.1-201ENST00000382990 339 ntBASIC13.8□□□□□ -0.2
SLC1A1P43005 AC092506.1-202ENST00000401022 528 ntBASIC13.8□□□□□ -0.2
SLC1A1P43005 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC13.8□□□□□ -0.2
SLC1A1P43005 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A1P43005 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC13.8□□□□□ -0.2
SLC1A1P43005 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A1P43005 TBC1D3P6-201ENST00000505954 962 ntBASIC13.8□□□□□ -0.2
SLC1A1P43005 CR383656.3-201ENST00000551315 183 ntBASIC13.8□□□□□ -0.2
SLC1A1P43005 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.8□□□□□ -0.2
SLC1A1P43005 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
SLC1A1P43005 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC13.8□□□□□ -0.2
SLC1A1P43005 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC13.8□□□□□ -0.2
SLC1A1P43005 RPL17P45-201ENST00000586289 509 ntBASIC13.8□□□□□ -0.2
SLC1A1P43005 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC13.8□□□□□ -0.2
SLC1A1P43005 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC13.8□□□□□ -0.2
SLC1A1P43005 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC13.8□□□□□ -0.2
SLC1A1P43005 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A1P43005 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SLC1A1P43005 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SLC1A1P43005 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A1P43005 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A1P43005 LINC02465-203ENST00000513875 1777 ntTSL 5 BASIC13.8□□□□□ -0.2
SLC1A1P43005 LINC00908-202ENST00000578613 2242 ntTSL 2 BASIC13.8□□□□□ -0.2
SLC1A1P43005 AP003108.3-201ENST00000623765 2234 ntBASIC13.8□□□□□ -0.2
SLC1A1P43005 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC13.8□□□□□ -0.2
SLC1A1P43005 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A1P43005 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A1P43005 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A1P43005 KCTD10-201ENST00000228495 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A1P43005 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A1P43005 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A1P43005 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A1P43005 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A1P43005 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A1P43005 VPS26A-203ENST00000395098 2554 ntTSL 5 BASIC13.79□□□□□ -0.2
SLC1A1P43005 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A1P43005 USO1-201ENST00000264904 4135 ntTSL 2 BASIC13.79□□□□□ -0.2
SLC1A1P43005 DFFB-201ENST00000338895 3105 ntTSL 2 BASIC13.79□□□□□ -0.2
SLC1A1P43005 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A1P43005 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC13.79□□□□□ -0.2
SLC1A1P43005 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC13.79□□□□□ -0.2
SLC1A1P43005 CHST4-202ENST00000539698 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A1P43005 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A1P43005 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC13.79□□□□□ -0.2
SLC1A1P43005 LILRA2-204ENST00000391738 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A1P43005 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC13.79□□□□□ -0.2
SLC1A1P43005 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A1P43005 MDM1-204ENST00000411698 2472 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
SLC1A1P43005 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms