Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDE6BP35913 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDE6BP35913 FAM9A-201ENST00000381003 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDE6BP35913 LINC01763-201ENST00000425185 1547 ntTSL 3 BASIC16.03■□□□□ 0.16
PDE6BP35913 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PDE6BP35913 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PDE6BP35913 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDE6BP35913 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
PDE6BP35913 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDE6BP35913 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDE6BP35913 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDE6BP35913 SETDB1-202ENST00000368962 1478 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDE6BP35913 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC16.03■□□□□ 0.16
PDE6BP35913 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDE6BP35913 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.03■□□□□ 0.16
PDE6BP35913 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDE6BP35913 SPAG8-201ENST00000340291 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDE6BP35913 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDE6BP35913 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC16.02■□□□□ 0.16
PDE6BP35913 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDE6BP35913 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
PDE6BP35913 SERPINE3-203ENST00000521255 1439 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PDE6BP35913 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
PDE6BP35913 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PDE6BP35913 HACD3-207ENST00000566074 1658 ntTSL 5 BASIC16.02■□□□□ 0.16
PDE6BP35913 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PDE6BP35913 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
PDE6BP35913 DTX2P1-201ENST00000425797 1633 ntBASIC16.02■□□□□ 0.16
PDE6BP35913 MEF2C-207ENST00000503554 1345 ntTSL 5 BASIC16.02■□□□□ 0.16
PDE6BP35913 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDE6BP35913 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PDE6BP35913 ZFP37-203ENST00000555206 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDE6BP35913 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDE6BP35913 AC009474.1-201ENST00000455096 1565 ntBASIC16.02■□□□□ 0.16
PDE6BP35913 ROPN1B-201ENST00000251776 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDE6BP35913 APOC2-201ENST00000252490 727 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PDE6BP35913 ARPC5-203ENST00000367534 622 ntTSL 3 BASIC16.02■□□□□ 0.16
PDE6BP35913 RNF7-202ENST00000393000 805 ntTSL 2 BASIC16.02■□□□□ 0.16
PDE6BP35913 LINC00544-201ENST00000400540 1031 ntTSL 5 BASIC16.02■□□□□ 0.16
PDE6BP35913 AL357054.1-201ENST00000407035 1227 ntBASIC16.02■□□□□ 0.16
PDE6BP35913 AC019349.1-201ENST00000411759 476 ntTSL 3 BASIC16.02■□□□□ 0.16
PDE6BP35913 RPP30-203ENST00000413330 1004 ntTSL 5 BASIC16.02■□□□□ 0.16
PDE6BP35913 AC006987.4-201ENST00000430032 279 ntBASIC16.02■□□□□ 0.16
PDE6BP35913 AL138828.1-208ENST00000585946 824 ntTSL 5 BASIC16.02■□□□□ 0.16
PDE6BP35913 AL353997.3-201ENST00000586597 589 ntBASIC16.02■□□□□ 0.16
PDE6BP35913 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDE6BP35913 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PDE6BP35913 JAML-211ENST00000533261 1508 ntTSL 5 BASIC16.02■□□□□ 0.15
PDE6BP35913 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC16.02■□□□□ 0.15
PDE6BP35913 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PDE6BP35913 M1AP-201ENST00000290536 2543 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PDE6BP35913 ZNF669-204ENST00000448299 1718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PDE6BP35913 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
PDE6BP35913 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PDE6BP35913 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PDE6BP35913 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC16.02■□□□□ 0.15
PDE6BP35913 PSMD13-201ENST00000352303 1427 ntTSL 5 BASIC16.02■□□□□ 0.15
PDE6BP35913 DNPEP-220ENST00000523282 1662 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
PDE6BP35913 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PDE6BP35913 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDE6BP35913 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDE6BP35913 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDE6BP35913 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDE6BP35913 SCHIP1-201ENST00000445224 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDE6BP35913 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDE6BP35913 AC034238.1-214ENST00000609699 1590 ntTSL 5 BASIC16.01■□□□□ 0.15
PDE6BP35913 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDE6BP35913 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDE6BP35913 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PDE6BP35913 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDE6BP35913 CACNG1-201ENST00000226021 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDE6BP35913 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDE6BP35913 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PDE6BP35913 PLPP4-201ENST00000369073 1135 ntTSL 5 BASIC16.01■□□□□ 0.15
PDE6BP35913 RPS21-202ENST00000370562 1002 ntTSL 2 BASIC16.01■□□□□ 0.15
PDE6BP35913 KRBOX4-203ENST00000377919 993 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
PDE6BP35913 IGLV2-33-201ENST00000390302 412 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PDE6BP35913 ARF1P2-201ENST00000392493 538 ntBASIC16.01■□□□□ 0.15
PDE6BP35913 AC064836.1-201ENST00000405197 704 ntBASIC16.01■□□□□ 0.15
PDE6BP35913 ALDH7A1-203ENST00000413020 1126 ntTSL 2 BASIC16.01■□□□□ 0.15
PDE6BP35913 LINC01297-202ENST00000453395 624 ntTSL 5 BASIC16.01■□□□□ 0.15
PDE6BP35913 C5orf38-203ENST00000457752 387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDE6BP35913 PGAP2-219ENST00000479072 894 ntTSL 3 BASIC16.01■□□□□ 0.15
PDE6BP35913 AC010442.2-201ENST00000509301 407 ntBASIC16.01■□□□□ 0.15
PDE6BP35913 AC011389.2-201ENST00000514811 365 ntTSL 2 BASIC16.01■□□□□ 0.15
PDE6BP35913 IGHV7-56-201ENST00000518372 351 ntBASIC16.01■□□□□ 0.15
PDE6BP35913 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC16.01■□□□□ 0.15
PDE6BP35913 TSHZ3-202ENST00000558569 441 ntTSL 2 BASIC16.01■□□□□ 0.15
PDE6BP35913 AC002347.2-201ENST00000584139 171 ntTSL 3 BASIC16.01■□□□□ 0.15
PDE6BP35913 AC011456.1-201ENST00000592270 536 ntTSL 4 BASIC16.01■□□□□ 0.15
PDE6BP35913 SARS2-211ENST00000598831 665 ntTSL 5 BASIC16.01■□□□□ 0.15
PDE6BP35913 LINC01615-203ENST00000634877 673 ntTSL 5 BASIC16.01■□□□□ 0.15
PDE6BP35913 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDE6BP35913 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC16.01■□□□□ 0.15
PDE6BP35913 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PDE6BP35913 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDE6BP35913 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDE6BP35913 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC16.01■□□□□ 0.15
PDE6BP35913 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PDE6BP35913 ZNF772-203ENST00000425074 1601 ntTSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms