Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC12.57□□□□□ -0.4
SCN2BO60939 L1CAM-202ENST00000361981 5004 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SCN2BO60939 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
SCN2BO60939 AC008676.1-201ENST00000508443 1932 ntTSL 5 BASIC12.56□□□□□ -0.4
SCN2BO60939 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC12.56□□□□□ -0.4
SCN2BO60939 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
SCN2BO60939 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.56□□□□□ -0.4
SCN2BO60939 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC12.56□□□□□ -0.4
SCN2BO60939 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC12.56□□□□□ -0.4
SCN2BO60939 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 BOLL-201ENST00000282278 2742 ntTSL 2 BASIC12.56□□□□□ -0.4
SCN2BO60939 AC090136.3-201ENST00000520834 2704 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 EPS15L1-201ENST00000248070 2924 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
SCN2BO60939 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 FAS-204ENST00000355740 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 ELOVL1-216ENST00000621943 1625 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
SCN2BO60939 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 GALNT15-203ENST00000437509 2416 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
SCN2BO60939 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 DENND1C-201ENST00000381480 2816 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
SCN2BO60939 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC12.56□□□□□ -0.4
SCN2BO60939 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC12.56□□□□□ -0.4
SCN2BO60939 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 DTX3L-202ENST00000383661 687 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
SCN2BO60939 RN7SKP109-201ENST00000410592 316 ntBASIC12.56□□□□□ -0.4
SCN2BO60939 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC12.56□□□□□ -0.4
SCN2BO60939 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC12.56□□□□□ -0.4
SCN2BO60939 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SCN2BO60939 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC12.56□□□□□ -0.4
SCN2BO60939 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC12.56□□□□□ -0.4
SCN2BO60939 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC12.56□□□□□ -0.4
SCN2BO60939 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 AL365203.1-201ENST00000450890 1048 ntTSL 3 BASIC12.56□□□□□ -0.4
SCN2BO60939 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC12.56□□□□□ -0.4
SCN2BO60939 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC12.56□□□□□ -0.4
SCN2BO60939 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC12.56□□□□□ -0.4
SCN2BO60939 AC107959.3-201ENST00000520840 484 ntTSL 5 BASIC12.56□□□□□ -0.4
SCN2BO60939 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC12.56□□□□□ -0.4
SCN2BO60939 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC12.56□□□□□ -0.4
SCN2BO60939 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC12.56□□□□□ -0.4
SCN2BO60939 MT3-202ENST00000561640 514 ntTSL 3 BASIC12.56□□□□□ -0.4
SCN2BO60939 AL133499.1-201ENST00000596207 608 ntBASIC12.56□□□□□ -0.4
SCN2BO60939 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
SCN2BO60939 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC12.56□□□□□ -0.4
SCN2BO60939 AC025262.2-201ENST00000623975 1056 ntBASIC12.56□□□□□ -0.4
SCN2BO60939 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC12.56□□□□□ -0.4
SCN2BO60939 AL139099.5-201ENST00000635274 300 ntBASIC12.56□□□□□ -0.4
SCN2BO60939 MSRA-202ENST00000382490 1460 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 SLC20A2-201ENST00000342228 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC12.56□□□□□ -0.4
SCN2BO60939 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC12.56□□□□□ -0.4
SCN2BO60939 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 AC022400.8-201ENST00000623453 3599 ntBASIC12.56□□□□□ -0.4
SCN2BO60939 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 TSFM-204ENST00000454289 2192 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 SPAG8-201ENST00000340291 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
SCN2BO60939 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SCN2BO60939 CCT8-201ENST00000286788 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SCN2BO60939 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SCN2BO60939 USP14-208ENST00000582707 1803 ntTSL 5 BASIC12.55□□□□□ -0.4
SCN2BO60939 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SCN2BO60939 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC12.55□□□□□ -0.4
SCN2BO60939 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SCN2BO60939 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SCN2BO60939 TGOLN2-206ENST00000444342 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SCN2BO60939 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC12.55□□□□□ -0.4
SCN2BO60939 ELMOD3-202ENST00000393852 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SCN2BO60939 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC12.55□□□□□ -0.4
SCN2BO60939 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SCN2BO60939 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SCN2BO60939 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms