Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
COMMD3-BMI1R4GMX3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
COMMD3-BMI1R4GMX3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.64■□□□□ 0.89
COMMD3-BMI1R4GMX3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
COMMD3-BMI1R4GMX3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.63■□□□□ 0.89
COMMD3-BMI1R4GMX3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
COMMD3-BMI1R4GMX3 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COMMD3-BMI1R4GMX3 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.63■□□□□ 0.89
COMMD3-BMI1R4GMX3 SPCS2P3-201ENST00000500401 656 ntBASIC20.63■□□□□ 0.89
COMMD3-BMI1R4GMX3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COMMD3-BMI1R4GMX3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
COMMD3-BMI1R4GMX3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
COMMD3-BMI1R4GMX3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
COMMD3-BMI1R4GMX3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
COMMD3-BMI1R4GMX3 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.62■□□□□ 0.89
COMMD3-BMI1R4GMX3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD3-BMI1R4GMX3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
COMMD3-BMI1R4GMX3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
COMMD3-BMI1R4GMX3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.62■□□□□ 0.89
COMMD3-BMI1R4GMX3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD3-BMI1R4GMX3 RPS2P7-201ENST00000447334 885 ntBASIC20.62■□□□□ 0.89
COMMD3-BMI1R4GMX3 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
COMMD3-BMI1R4GMX3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD3-BMI1R4GMX3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.62■□□□□ 0.89
COMMD3-BMI1R4GMX3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD3-BMI1R4GMX3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD3-BMI1R4GMX3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD3-BMI1R4GMX3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.62■□□□□ 0.89
COMMD3-BMI1R4GMX3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD3-BMI1R4GMX3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COMMD3-BMI1R4GMX3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD3-BMI1R4GMX3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.61■□□□□ 0.89
COMMD3-BMI1R4GMX3 AC139530.1-201ENST00000575312 1977 ntBASIC20.61■□□□□ 0.89
COMMD3-BMI1R4GMX3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD3-BMI1R4GMX3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD3-BMI1R4GMX3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD3-BMI1R4GMX3 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD3-BMI1R4GMX3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.61■□□□□ 0.89
COMMD3-BMI1R4GMX3 AC018755.3-202ENST00000596210 929 ntBASIC20.61■□□□□ 0.89
COMMD3-BMI1R4GMX3 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
COMMD3-BMI1R4GMX3 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.61■□□□□ 0.89
COMMD3-BMI1R4GMX3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
COMMD3-BMI1R4GMX3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD3-BMI1R4GMX3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD3-BMI1R4GMX3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
COMMD3-BMI1R4GMX3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COMMD3-BMI1R4GMX3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
COMMD3-BMI1R4GMX3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.61■□□□□ 0.89
COMMD3-BMI1R4GMX3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
COMMD3-BMI1R4GMX3 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COMMD3-BMI1R4GMX3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COMMD3-BMI1R4GMX3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COMMD3-BMI1R4GMX3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COMMD3-BMI1R4GMX3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
COMMD3-BMI1R4GMX3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
COMMD3-BMI1R4GMX3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
COMMD3-BMI1R4GMX3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COMMD3-BMI1R4GMX3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.6■□□□□ 0.89
COMMD3-BMI1R4GMX3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COMMD3-BMI1R4GMX3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COMMD3-BMI1R4GMX3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.59■□□□□ 0.89
COMMD3-BMI1R4GMX3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COMMD3-BMI1R4GMX3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.59■□□□□ 0.89
COMMD3-BMI1R4GMX3 RARRES2P2-201ENST00000394842 485 ntBASIC20.59■□□□□ 0.89
COMMD3-BMI1R4GMX3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COMMD3-BMI1R4GMX3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.59■□□□□ 0.89
COMMD3-BMI1R4GMX3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COMMD3-BMI1R4GMX3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.59■□□□□ 0.89
COMMD3-BMI1R4GMX3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COMMD3-BMI1R4GMX3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.59■□□□□ 0.89
COMMD3-BMI1R4GMX3 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.59■□□□□ 0.89
COMMD3-BMI1R4GMX3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
COMMD3-BMI1R4GMX3 AC005229.4-201ENST00000610085 2198 ntBASIC20.58■□□□□ 0.89
COMMD3-BMI1R4GMX3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
COMMD3-BMI1R4GMX3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COMMD3-BMI1R4GMX3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
COMMD3-BMI1R4GMX3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COMMD3-BMI1R4GMX3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.58■□□□□ 0.89
COMMD3-BMI1R4GMX3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.58■□□□□ 0.89
COMMD3-BMI1R4GMX3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.58■□□□□ 0.89
COMMD3-BMI1R4GMX3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
COMMD3-BMI1R4GMX3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.58■□□□□ 0.89
COMMD3-BMI1R4GMX3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.58■□□□□ 0.89
COMMD3-BMI1R4GMX3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.58■□□□□ 0.89
COMMD3-BMI1R4GMX3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
COMMD3-BMI1R4GMX3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
COMMD3-BMI1R4GMX3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COMMD3-BMI1R4GMX3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
COMMD3-BMI1R4GMX3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.57■□□□□ 0.88
COMMD3-BMI1R4GMX3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COMMD3-BMI1R4GMX3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
COMMD3-BMI1R4GMX3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COMMD3-BMI1R4GMX3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.57■□□□□ 0.88
COMMD3-BMI1R4GMX3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.57■□□□□ 0.88
COMMD3-BMI1R4GMX3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
COMMD3-BMI1R4GMX3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
COMMD3-BMI1R4GMX3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
COMMD3-BMI1R4GMX3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
COMMD3-BMI1R4GMX3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
COMMD3-BMI1R4GMX3 DUX4L9-201ENST00000449051 1259 ntBASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms