Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
DNMT3AQ9Y6K1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
DNMT3AQ9Y6K1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
DNMT3AQ9Y6K1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DNMT3AQ9Y6K1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.65■■□□□ 1.06
DNMT3AQ9Y6K1 CA15P2-201ENST00000611168 834 ntBASIC21.65■■□□□ 1.06
DNMT3AQ9Y6K1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
DNMT3AQ9Y6K1 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
DNMT3AQ9Y6K1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
DNMT3AQ9Y6K1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
DNMT3AQ9Y6K1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.64■■□□□ 1.06
DNMT3AQ9Y6K1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
DNMT3AQ9Y6K1 DUSP8P5-201ENST00000422884 1815 ntBASIC21.64■■□□□ 1.06
DNMT3AQ9Y6K1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
DNMT3AQ9Y6K1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.64■■□□□ 1.06
DNMT3AQ9Y6K1 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
DNMT3AQ9Y6K1 AC019069.1-201ENST00000610008 1333 ntBASIC21.64■■□□□ 1.05
DNMT3AQ9Y6K1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
DNMT3AQ9Y6K1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
DNMT3AQ9Y6K1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.64■■□□□ 1.05
DNMT3AQ9Y6K1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
DNMT3AQ9Y6K1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.64■■□□□ 1.05
DNMT3AQ9Y6K1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.64■■□□□ 1.05
DNMT3AQ9Y6K1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
DNMT3AQ9Y6K1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
DNMT3AQ9Y6K1 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.64■■□□□ 1.05
DNMT3AQ9Y6K1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
DNMT3AQ9Y6K1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
DNMT3AQ9Y6K1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.63■■□□□ 1.05
DNMT3AQ9Y6K1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
DNMT3AQ9Y6K1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.63■■□□□ 1.05
DNMT3AQ9Y6K1 AC126544.1-201ENST00000580842 1059 ntBASIC21.63■■□□□ 1.05
DNMT3AQ9Y6K1 AC010525.1-201ENST00000585559 441 ntBASIC21.63■■□□□ 1.05
DNMT3AQ9Y6K1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DNMT3AQ9Y6K1 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
DNMT3AQ9Y6K1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
DNMT3AQ9Y6K1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DNMT3AQ9Y6K1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DNMT3AQ9Y6K1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DNMT3AQ9Y6K1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DNMT3AQ9Y6K1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DNMT3AQ9Y6K1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.62■■□□□ 1.05
DNMT3AQ9Y6K1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.62■■□□□ 1.05
DNMT3AQ9Y6K1 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DNMT3AQ9Y6K1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.62■■□□□ 1.05
DNMT3AQ9Y6K1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.62■■□□□ 1.05
DNMT3AQ9Y6K1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.62■■□□□ 1.05
DNMT3AQ9Y6K1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.62■■□□□ 1.05
DNMT3AQ9Y6K1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
DNMT3AQ9Y6K1 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
DNMT3AQ9Y6K1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DNMT3AQ9Y6K1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.61■■□□□ 1.05
DNMT3AQ9Y6K1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
DNMT3AQ9Y6K1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
DNMT3AQ9Y6K1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.61■■□□□ 1.05
DNMT3AQ9Y6K1 AL031602.1-201ENST00000633169 911 ntBASIC21.61■■□□□ 1.05
DNMT3AQ9Y6K1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
DNMT3AQ9Y6K1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
DNMT3AQ9Y6K1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.61■■□□□ 1.05
DNMT3AQ9Y6K1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
DNMT3AQ9Y6K1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.6■■□□□ 1.05
DNMT3AQ9Y6K1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.6■■□□□ 1.05
DNMT3AQ9Y6K1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.6■■□□□ 1.05
DNMT3AQ9Y6K1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DNMT3AQ9Y6K1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
DNMT3AQ9Y6K1 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DNMT3AQ9Y6K1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
DNMT3AQ9Y6K1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
DNMT3AQ9Y6K1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DNMT3AQ9Y6K1 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DNMT3AQ9Y6K1 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
DNMT3AQ9Y6K1 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
DNMT3AQ9Y6K1 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.59■■□□□ 1.05
DNMT3AQ9Y6K1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.59■■□□□ 1.05
DNMT3AQ9Y6K1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
DNMT3AQ9Y6K1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
DNMT3AQ9Y6K1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.59■■□□□ 1.05
DNMT3AQ9Y6K1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.59■■□□□ 1.05
DNMT3AQ9Y6K1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
DNMT3AQ9Y6K1 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
DNMT3AQ9Y6K1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.58■■□□□ 1.05
DNMT3AQ9Y6K1 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.58■■□□□ 1.05
DNMT3AQ9Y6K1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.58■■□□□ 1.05
DNMT3AQ9Y6K1 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
DNMT3AQ9Y6K1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
DNMT3AQ9Y6K1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
DNMT3AQ9Y6K1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.05
DNMT3AQ9Y6K1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.58■■□□□ 1.05
DNMT3AQ9Y6K1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.58■■□□□ 1.05
DNMT3AQ9Y6K1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.58■■□□□ 1.04
DNMT3AQ9Y6K1 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
DNMT3AQ9Y6K1 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.58■■□□□ 1.04
DNMT3AQ9Y6K1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
DNMT3AQ9Y6K1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
DNMT3AQ9Y6K1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
DNMT3AQ9Y6K1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DNMT3AQ9Y6K1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
DNMT3AQ9Y6K1 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DNMT3AQ9Y6K1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
DNMT3AQ9Y6K1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms