Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
AP4B1Q9Y6B7 AC092053.2-201ENST00000640557 1818 ntBASIC21.06■□□□□ 0.96
AP4B1Q9Y6B7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP4B1Q9Y6B7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
AP4B1Q9Y6B7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
AP4B1Q9Y6B7 AC139530.1-201ENST00000575312 1977 ntBASIC21.05■□□□□ 0.96
AP4B1Q9Y6B7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
AP4B1Q9Y6B7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
AP4B1Q9Y6B7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.05■□□□□ 0.96
AP4B1Q9Y6B7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
AP4B1Q9Y6B7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.05■□□□□ 0.96
AP4B1Q9Y6B7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.05■□□□□ 0.96
AP4B1Q9Y6B7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
AP4B1Q9Y6B7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
AP4B1Q9Y6B7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
AP4B1Q9Y6B7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
AP4B1Q9Y6B7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
AP4B1Q9Y6B7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
AP4B1Q9Y6B7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
AP4B1Q9Y6B7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
AP4B1Q9Y6B7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
AP4B1Q9Y6B7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
AP4B1Q9Y6B7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
AP4B1Q9Y6B7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP4B1Q9Y6B7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP4B1Q9Y6B7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP4B1Q9Y6B7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.04■□□□□ 0.96
AP4B1Q9Y6B7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP4B1Q9Y6B7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
AP4B1Q9Y6B7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
AP4B1Q9Y6B7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
AP4B1Q9Y6B7 KRT125P-201ENST00000546827 989 ntBASIC21.04■□□□□ 0.96
AP4B1Q9Y6B7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
AP4B1Q9Y6B7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
AP4B1Q9Y6B7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.03■□□□□ 0.96
AP4B1Q9Y6B7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
AP4B1Q9Y6B7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
AP4B1Q9Y6B7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.03■□□□□ 0.96
AP4B1Q9Y6B7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.03■□□□□ 0.96
AP4B1Q9Y6B7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
AP4B1Q9Y6B7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
AP4B1Q9Y6B7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
AP4B1Q9Y6B7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.03■□□□□ 0.96
AP4B1Q9Y6B7 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.03■□□□□ 0.96
AP4B1Q9Y6B7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.03■□□□□ 0.96
AP4B1Q9Y6B7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.03■□□□□ 0.96
AP4B1Q9Y6B7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.03■□□□□ 0.96
AP4B1Q9Y6B7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.03■□□□□ 0.96
AP4B1Q9Y6B7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
AP4B1Q9Y6B7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP4B1Q9Y6B7 AC026310.3-201ENST00000625186 2373 ntBASIC21.02■□□□□ 0.96
AP4B1Q9Y6B7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
AP4B1Q9Y6B7 AC239859.2-201ENST00000444165 318 ntBASIC21.02■□□□□ 0.96
AP4B1Q9Y6B7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.02■□□□□ 0.96
AP4B1Q9Y6B7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.02■□□□□ 0.96
AP4B1Q9Y6B7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.02■□□□□ 0.96
AP4B1Q9Y6B7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
AP4B1Q9Y6B7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
AP4B1Q9Y6B7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP4B1Q9Y6B7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
AP4B1Q9Y6B7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.01■□□□□ 0.95
AP4B1Q9Y6B7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.01■□□□□ 0.95
AP4B1Q9Y6B7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
AP4B1Q9Y6B7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
AP4B1Q9Y6B7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
AP4B1Q9Y6B7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
AP4B1Q9Y6B7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
AP4B1Q9Y6B7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP4B1Q9Y6B7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP4B1Q9Y6B7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
AP4B1Q9Y6B7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP4B1Q9Y6B7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
AP4B1Q9Y6B7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
AP4B1Q9Y6B7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21■□□□□ 0.95
AP4B1Q9Y6B7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
AP4B1Q9Y6B7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21■□□□□ 0.95
AP4B1Q9Y6B7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
AP4B1Q9Y6B7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21■□□□□ 0.95
AP4B1Q9Y6B7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
AP4B1Q9Y6B7 OR2A1-AS1-204ENST00000470435 602 ntBASIC21■□□□□ 0.95
AP4B1Q9Y6B7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21■□□□□ 0.95
AP4B1Q9Y6B7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
AP4B1Q9Y6B7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
AP4B1Q9Y6B7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
AP4B1Q9Y6B7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
AP4B1Q9Y6B7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
AP4B1Q9Y6B7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP4B1Q9Y6B7 AC021242.3-201ENST00000607598 1377 ntBASIC20.99■□□□□ 0.95
AP4B1Q9Y6B7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP4B1Q9Y6B7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
AP4B1Q9Y6B7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
AP4B1Q9Y6B7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.99■□□□□ 0.95
AP4B1Q9Y6B7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
AP4B1Q9Y6B7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.99■□□□□ 0.95
AP4B1Q9Y6B7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.99■□□□□ 0.95
AP4B1Q9Y6B7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
AP4B1Q9Y6B7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
AP4B1Q9Y6B7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP4B1Q9Y6B7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
AP4B1Q9Y6B7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms