Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
HCFC2Q9Y5Z7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.34■■□□□ 1.33
HCFC2Q9Y5Z7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
HCFC2Q9Y5Z7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.34■■□□□ 1.33
HCFC2Q9Y5Z7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.34■■□□□ 1.33
HCFC2Q9Y5Z7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
HCFC2Q9Y5Z7 AC138932.3-201ENST00000567634 1902 ntBASIC23.33■■□□□ 1.33
HCFC2Q9Y5Z7 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
HCFC2Q9Y5Z7 AC026185.1-201ENST00000445748 174 ntBASIC23.33■■□□□ 1.33
HCFC2Q9Y5Z7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
HCFC2Q9Y5Z7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
HCFC2Q9Y5Z7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.32
HCFC2Q9Y5Z7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.32
HCFC2Q9Y5Z7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
HCFC2Q9Y5Z7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HCFC2Q9Y5Z7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
HCFC2Q9Y5Z7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HCFC2Q9Y5Z7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.32■■□□□ 1.32
HCFC2Q9Y5Z7 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
HCFC2Q9Y5Z7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC23.32■■□□□ 1.32
HCFC2Q9Y5Z7 BID-214ENST00000617586 542 ntTSL 5 BASIC23.32■■□□□ 1.32
HCFC2Q9Y5Z7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
HCFC2Q9Y5Z7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HCFC2Q9Y5Z7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HCFC2Q9Y5Z7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HCFC2Q9Y5Z7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
HCFC2Q9Y5Z7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HCFC2Q9Y5Z7 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
HCFC2Q9Y5Z7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
HCFC2Q9Y5Z7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HCFC2Q9Y5Z7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HCFC2Q9Y5Z7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HCFC2Q9Y5Z7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HCFC2Q9Y5Z7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.31■■□□□ 1.32
HCFC2Q9Y5Z7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC23.31■■□□□ 1.32
HCFC2Q9Y5Z7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
HCFC2Q9Y5Z7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC23.31■■□□□ 1.32
HCFC2Q9Y5Z7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC23.31■■□□□ 1.32
HCFC2Q9Y5Z7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC23.31■■□□□ 1.32
HCFC2Q9Y5Z7 BX005040.4-201ENST00000637145 1518 ntBASIC23.31■■□□□ 1.32
HCFC2Q9Y5Z7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.31■■□□□ 1.32
HCFC2Q9Y5Z7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HCFC2Q9Y5Z7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
HCFC2Q9Y5Z7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.3■■□□□ 1.32
HCFC2Q9Y5Z7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
HCFC2Q9Y5Z7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
HCFC2Q9Y5Z7 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.3■■□□□ 1.32
HCFC2Q9Y5Z7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.3■■□□□ 1.32
HCFC2Q9Y5Z7 AC104771.1-201ENST00000603335 964 ntBASIC23.3■■□□□ 1.32
HCFC2Q9Y5Z7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
HCFC2Q9Y5Z7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
HCFC2Q9Y5Z7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
HCFC2Q9Y5Z7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
HCFC2Q9Y5Z7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
HCFC2Q9Y5Z7 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.29■■□□□ 1.32
HCFC2Q9Y5Z7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.29■■□□□ 1.32
HCFC2Q9Y5Z7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.29■■□□□ 1.32
HCFC2Q9Y5Z7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
HCFC2Q9Y5Z7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
HCFC2Q9Y5Z7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
HCFC2Q9Y5Z7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
HCFC2Q9Y5Z7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.28■■□□□ 1.32
HCFC2Q9Y5Z7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.28■■□□□ 1.32
HCFC2Q9Y5Z7 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.28■■□□□ 1.32
HCFC2Q9Y5Z7 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
HCFC2Q9Y5Z7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
HCFC2Q9Y5Z7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.28■■□□□ 1.32
HCFC2Q9Y5Z7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.28■■□□□ 1.32
HCFC2Q9Y5Z7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
HCFC2Q9Y5Z7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.28■■□□□ 1.32
HCFC2Q9Y5Z7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HCFC2Q9Y5Z7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
HCFC2Q9Y5Z7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC23.27■■□□□ 1.32
HCFC2Q9Y5Z7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
HCFC2Q9Y5Z7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC23.27■■□□□ 1.32
HCFC2Q9Y5Z7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
HCFC2Q9Y5Z7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23.27■■□□□ 1.32
HCFC2Q9Y5Z7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
HCFC2Q9Y5Z7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
HCFC2Q9Y5Z7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.27■■□□□ 1.32
HCFC2Q9Y5Z7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.27■■□□□ 1.32
HCFC2Q9Y5Z7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
HCFC2Q9Y5Z7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HCFC2Q9Y5Z7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
HCFC2Q9Y5Z7 KRT19P1-201ENST00000405746 1186 ntBASIC23.26■■□□□ 1.31
HCFC2Q9Y5Z7 CROCCP5-201ENST00000436658 830 ntBASIC23.26■■□□□ 1.31
HCFC2Q9Y5Z7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.26■■□□□ 1.31
HCFC2Q9Y5Z7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC23.26■■□□□ 1.31
HCFC2Q9Y5Z7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HCFC2Q9Y5Z7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HCFC2Q9Y5Z7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HCFC2Q9Y5Z7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HCFC2Q9Y5Z7 AC006970.2-201ENST00000450065 779 ntBASIC23.25■■□□□ 1.31
HCFC2Q9Y5Z7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.25■■□□□ 1.31
HCFC2Q9Y5Z7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.25■■□□□ 1.31
HCFC2Q9Y5Z7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC23.25■■□□□ 1.31
HCFC2Q9Y5Z7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
HCFC2Q9Y5Z7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
HCFC2Q9Y5Z7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
HCFC2Q9Y5Z7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms