Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 AC133637.1-201ENST00000624115 1537 ntBASIC24.78■■□□□ 1.56
PCDHA2Q9Y5H9 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
PCDHA2Q9Y5H9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHA2Q9Y5H9 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.78■■□□□ 1.56
PCDHA2Q9Y5H9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHA2Q9Y5H9 DUX4L4-201ENST00000566884 1269 ntBASIC24.78■■□□□ 1.56
PCDHA2Q9Y5H9 AC126544.1-201ENST00000580842 1059 ntBASIC24.78■■□□□ 1.56
PCDHA2Q9Y5H9 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHA2Q9Y5H9 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHA2Q9Y5H9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHA2Q9Y5H9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC24.77■■□□□ 1.56
PCDHA2Q9Y5H9 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC24.77■■□□□ 1.56
PCDHA2Q9Y5H9 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHA2Q9Y5H9 JTB-203ENST00000368589 1216 ntTSL 2 BASIC24.77■■□□□ 1.56
PCDHA2Q9Y5H9 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHA2Q9Y5H9 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
PCDHA2Q9Y5H9 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC24.77■■□□□ 1.56
PCDHA2Q9Y5H9 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC24.77■■□□□ 1.56
PCDHA2Q9Y5H9 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC24.77■■□□□ 1.56
PCDHA2Q9Y5H9 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHA2Q9Y5H9 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.77■■□□□ 1.56
PCDHA2Q9Y5H9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC24.77■■□□□ 1.56
PCDHA2Q9Y5H9 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.76■■□□□ 1.55
PCDHA2Q9Y5H9 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC24.76■■□□□ 1.55
PCDHA2Q9Y5H9 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC24.76■■□□□ 1.55
PCDHA2Q9Y5H9 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHA2Q9Y5H9 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHA2Q9Y5H9 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC24.76■■□□□ 1.55
PCDHA2Q9Y5H9 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC24.76■■□□□ 1.55
PCDHA2Q9Y5H9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC24.76■■□□□ 1.55
PCDHA2Q9Y5H9 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHA2Q9Y5H9 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHA2Q9Y5H9 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHA2Q9Y5H9 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHA2Q9Y5H9 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHA2Q9Y5H9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHA2Q9Y5H9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHA2Q9Y5H9 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC24.75■■□□□ 1.55
PCDHA2Q9Y5H9 AC133561.1-201ENST00000568600 2415 ntBASIC24.75■■□□□ 1.55
PCDHA2Q9Y5H9 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHA2Q9Y5H9 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHA2Q9Y5H9 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.75■■□□□ 1.55
PCDHA2Q9Y5H9 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHA2Q9Y5H9 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
PCDHA2Q9Y5H9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC24.75■■□□□ 1.55
PCDHA2Q9Y5H9 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHA2Q9Y5H9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC24.75■■□□□ 1.55
PCDHA2Q9Y5H9 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC24.75■■□□□ 1.55
PCDHA2Q9Y5H9 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHA2Q9Y5H9 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
PCDHA2Q9Y5H9 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHA2Q9Y5H9 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHA2Q9Y5H9 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
PCDHA2Q9Y5H9 AC087623.3-201ENST00000607047 1098 ntBASIC24.74■■□□□ 1.55
PCDHA2Q9Y5H9 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC24.74■■□□□ 1.55
PCDHA2Q9Y5H9 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
PCDHA2Q9Y5H9 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHA2Q9Y5H9 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.74■■□□□ 1.55
PCDHA2Q9Y5H9 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
PCDHA2Q9Y5H9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.73■■□□□ 1.55
PCDHA2Q9Y5H9 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHA2Q9Y5H9 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHA2Q9Y5H9 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHA2Q9Y5H9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC24.73■■□□□ 1.55
PCDHA2Q9Y5H9 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC24.73■■□□□ 1.55
PCDHA2Q9Y5H9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC24.73■■□□□ 1.55
PCDHA2Q9Y5H9 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC24.73■■□□□ 1.55
PCDHA2Q9Y5H9 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHA2Q9Y5H9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.72■■□□□ 1.55
PCDHA2Q9Y5H9 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHA2Q9Y5H9 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHA2Q9Y5H9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
PCDHA2Q9Y5H9 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHA2Q9Y5H9 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC24.72■■□□□ 1.55
PCDHA2Q9Y5H9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC24.72■■□□□ 1.55
PCDHA2Q9Y5H9 AC092666.2-201ENST00000613287 246 ntBASIC24.72■■□□□ 1.55
PCDHA2Q9Y5H9 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHA2Q9Y5H9 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
PCDHA2Q9Y5H9 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHA2Q9Y5H9 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHA2Q9Y5H9 AICDA-202ENST00000537228 667 ntTSL 5 BASIC24.71■■□□□ 1.55
PCDHA2Q9Y5H9 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHA2Q9Y5H9 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
PCDHA2Q9Y5H9 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC24.71■■□□□ 1.55
PCDHA2Q9Y5H9 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHA2Q9Y5H9 LINC01529-204ENST00000636474 1715 ntBASIC24.71■■□□□ 1.55
PCDHA2Q9Y5H9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24.71■■□□□ 1.55
PCDHA2Q9Y5H9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.71■■□□□ 1.55
PCDHA2Q9Y5H9 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHA2Q9Y5H9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.71■■□□□ 1.55
PCDHA2Q9Y5H9 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC24.7■■□□□ 1.55
PCDHA2Q9Y5H9 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
PCDHA2Q9Y5H9 TSPY26P-201ENST00000476365 1326 ntBASIC24.7■■□□□ 1.54
PCDHA2Q9Y5H9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHA2Q9Y5H9 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
PCDHA2Q9Y5H9 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC24.7■■□□□ 1.54
PCDHA2Q9Y5H9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC24.7■■□□□ 1.54
PCDHA2Q9Y5H9 ANKRD20A6P-201ENST00000618763 204 ntBASIC24.7■■□□□ 1.54
PCDHA2Q9Y5H9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.7■■□□□ 1.54
PCDHA2Q9Y5H9 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms