Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGB6Q9Y5F9 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.73■□□□□ 0.91
PCDHGB6Q9Y5F9 MIR4767-201ENST00000582827 78 ntBASIC20.73■□□□□ 0.91
PCDHGB6Q9Y5F9 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PCDHGB6Q9Y5F9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
PCDHGB6Q9Y5F9 ALDH1A3-203ENST00000557963 1670 ntBASIC20.73■□□□□ 0.91
PCDHGB6Q9Y5F9 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGB6Q9Y5F9 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHGB6Q9Y5F9 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGB6Q9Y5F9 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGB6Q9Y5F9 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGB6Q9Y5F9 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
PCDHGB6Q9Y5F9 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.72■□□□□ 0.91
PCDHGB6Q9Y5F9 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHGB6Q9Y5F9 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHGB6Q9Y5F9 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHGB6Q9Y5F9 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHGB6Q9Y5F9 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
PCDHGB6Q9Y5F9 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHGB6Q9Y5F9 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHGB6Q9Y5F9 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PCDHGB6Q9Y5F9 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PCDHGB6Q9Y5F9 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGB6Q9Y5F9 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGB6Q9Y5F9 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGB6Q9Y5F9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGB6Q9Y5F9 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGB6Q9Y5F9 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGB6Q9Y5F9 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PCDHGB6Q9Y5F9 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
PCDHGB6Q9Y5F9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
PCDHGB6Q9Y5F9 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDHGB6Q9Y5F9 RASA4CP-201ENST00000424092 1398 ntBASIC20.71■□□□□ 0.91
PCDHGB6Q9Y5F9 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
PCDHGB6Q9Y5F9 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGB6Q9Y5F9 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGB6Q9Y5F9 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHGB6Q9Y5F9 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGB6Q9Y5F9 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGB6Q9Y5F9 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGB6Q9Y5F9 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGB6Q9Y5F9 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
PCDHGB6Q9Y5F9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
PCDHGB6Q9Y5F9 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDHGB6Q9Y5F9 AC027682.1-201ENST00000562846 899 ntBASIC20.7■□□□□ 0.9
PCDHGB6Q9Y5F9 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGB6Q9Y5F9 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGB6Q9Y5F9 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGB6Q9Y5F9 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDHGB6Q9Y5F9 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGB6Q9Y5F9 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGB6Q9Y5F9 AC233723.2-201ENST00000623798 2106 ntBASIC20.69■□□□□ 0.9
PCDHGB6Q9Y5F9 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGB6Q9Y5F9 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGB6Q9Y5F9 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGB6Q9Y5F9 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
PCDHGB6Q9Y5F9 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGB6Q9Y5F9 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDHGB6Q9Y5F9 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGB6Q9Y5F9 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGB6Q9Y5F9 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGB6Q9Y5F9 AC105265.2-201ENST00000467189 838 ntBASIC20.69■□□□□ 0.9
PCDHGB6Q9Y5F9 RARRES2P6-201ENST00000567333 442 ntBASIC20.69■□□□□ 0.9
PCDHGB6Q9Y5F9 AC136469.2-201ENST00000623944 1028 ntBASIC20.69■□□□□ 0.9
PCDHGB6Q9Y5F9 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDHGB6Q9Y5F9 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDHGB6Q9Y5F9 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDHGB6Q9Y5F9 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDHGB6Q9Y5F9 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PCDHGB6Q9Y5F9 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDHGB6Q9Y5F9 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDHGB6Q9Y5F9 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDHGB6Q9Y5F9 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDHGB6Q9Y5F9 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.68■□□□□ 0.9
PCDHGB6Q9Y5F9 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGB6Q9Y5F9 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDHGB6Q9Y5F9 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGB6Q9Y5F9 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDHGB6Q9Y5F9 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGB6Q9Y5F9 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGB6Q9Y5F9 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGB6Q9Y5F9 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDHGB6Q9Y5F9 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGB6Q9Y5F9 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PCDHGB6Q9Y5F9 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGB6Q9Y5F9 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHGB6Q9Y5F9 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHGB6Q9Y5F9 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.67■□□□□ 0.9
PCDHGB6Q9Y5F9 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDHGB6Q9Y5F9 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHGB6Q9Y5F9 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGB6Q9Y5F9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
PCDHGB6Q9Y5F9 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGB6Q9Y5F9 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGB6Q9Y5F9 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDHGB6Q9Y5F9 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDHGB6Q9Y5F9 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGB6Q9Y5F9 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGB6Q9Y5F9 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDHGB6Q9Y5F9 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms