Protein–RNA interactions for Protein: Q9Y256

RCE1, CAAX prenyl protease 2, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCE1Q9Y256 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
RCE1Q9Y256 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RCE1Q9Y256 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RCE1Q9Y256 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RCE1Q9Y256 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.83■□□□□ 0.77
RCE1Q9Y256 AC131281.2-201ENST00000520478 145 ntBASIC19.83■□□□□ 0.77
RCE1Q9Y256 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.83■□□□□ 0.76
RCE1Q9Y256 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RCE1Q9Y256 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
RCE1Q9Y256 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RCE1Q9Y256 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RCE1Q9Y256 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.83■□□□□ 0.76
RCE1Q9Y256 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RCE1Q9Y256 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RCE1Q9Y256 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RCE1Q9Y256 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RCE1Q9Y256 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RCE1Q9Y256 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RCE1Q9Y256 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.82■□□□□ 0.76
RCE1Q9Y256 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
RCE1Q9Y256 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RCE1Q9Y256 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RCE1Q9Y256 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.82■□□□□ 0.76
RCE1Q9Y256 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RCE1Q9Y256 AL353803.4-201ENST00000565882 1934 ntBASIC19.82■□□□□ 0.76
RCE1Q9Y256 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.82■□□□□ 0.76
RCE1Q9Y256 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.82■□□□□ 0.76
RCE1Q9Y256 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RCE1Q9Y256 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RCE1Q9Y256 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RCE1Q9Y256 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RCE1Q9Y256 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RCE1Q9Y256 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RCE1Q9Y256 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
RCE1Q9Y256 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RCE1Q9Y256 AC092171.4-201ENST00000609130 632 ntBASIC19.81■□□□□ 0.76
RCE1Q9Y256 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.81■□□□□ 0.76
RCE1Q9Y256 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
RCE1Q9Y256 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RCE1Q9Y256 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.81■□□□□ 0.76
RCE1Q9Y256 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RCE1Q9Y256 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RCE1Q9Y256 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RCE1Q9Y256 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RCE1Q9Y256 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
RCE1Q9Y256 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RCE1Q9Y256 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RCE1Q9Y256 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RCE1Q9Y256 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.8■□□□□ 0.76
RCE1Q9Y256 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.8■□□□□ 0.76
RCE1Q9Y256 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RCE1Q9Y256 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RCE1Q9Y256 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.8■□□□□ 0.76
RCE1Q9Y256 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RCE1Q9Y256 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RCE1Q9Y256 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RCE1Q9Y256 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RCE1Q9Y256 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RCE1Q9Y256 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RCE1Q9Y256 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RCE1Q9Y256 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RCE1Q9Y256 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.79■□□□□ 0.76
RCE1Q9Y256 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RCE1Q9Y256 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RCE1Q9Y256 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RCE1Q9Y256 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.79■□□□□ 0.76
RCE1Q9Y256 MIR4466-201ENST00000606121 54 ntBASIC19.79■□□□□ 0.76
RCE1Q9Y256 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.79■□□□□ 0.76
RCE1Q9Y256 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RCE1Q9Y256 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RCE1Q9Y256 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RCE1Q9Y256 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RCE1Q9Y256 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
RCE1Q9Y256 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RCE1Q9Y256 AC009086.3-201ENST00000623486 1008 ntBASIC19.78■□□□□ 0.76
RCE1Q9Y256 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.78■□□□□ 0.76
RCE1Q9Y256 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RCE1Q9Y256 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RCE1Q9Y256 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RCE1Q9Y256 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RCE1Q9Y256 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
RCE1Q9Y256 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.77■□□□□ 0.76
RCE1Q9Y256 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
RCE1Q9Y256 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.77■□□□□ 0.76
RCE1Q9Y256 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RCE1Q9Y256 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.77■□□□□ 0.76
RCE1Q9Y256 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.77■□□□□ 0.76
RCE1Q9Y256 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RCE1Q9Y256 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RCE1Q9Y256 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RCE1Q9Y256 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.77■□□□□ 0.76
RCE1Q9Y256 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.77■□□□□ 0.76
RCE1Q9Y256 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.77■□□□□ 0.76
RCE1Q9Y256 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.77■□□□□ 0.75
RCE1Q9Y256 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RCE1Q9Y256 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.76■□□□□ 0.75
RCE1Q9Y256 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RCE1Q9Y256 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RCE1Q9Y256 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RCE1Q9Y256 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms