Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NUP50Q9UKX7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
NUP50Q9UKX7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NUP50Q9UKX7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NUP50Q9UKX7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
NUP50Q9UKX7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUP50Q9UKX7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUP50Q9UKX7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.11■□□□□ 0.65
NUP50Q9UKX7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUP50Q9UKX7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.11■□□□□ 0.65
NUP50Q9UKX7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.11■□□□□ 0.65
NUP50Q9UKX7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.11■□□□□ 0.65
NUP50Q9UKX7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUP50Q9UKX7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUP50Q9UKX7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUP50Q9UKX7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.11■□□□□ 0.65
NUP50Q9UKX7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.11■□□□□ 0.65
NUP50Q9UKX7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.11■□□□□ 0.65
NUP50Q9UKX7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUP50Q9UKX7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUP50Q9UKX7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
NUP50Q9UKX7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NUP50Q9UKX7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.1■□□□□ 0.65
NUP50Q9UKX7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.1■□□□□ 0.65
NUP50Q9UKX7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.1■□□□□ 0.65
NUP50Q9UKX7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.1■□□□□ 0.65
NUP50Q9UKX7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.1■□□□□ 0.65
NUP50Q9UKX7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.1■□□□□ 0.65
NUP50Q9UKX7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
NUP50Q9UKX7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
NUP50Q9UKX7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
NUP50Q9UKX7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NUP50Q9UKX7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
NUP50Q9UKX7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.09■□□□□ 0.65
NUP50Q9UKX7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NUP50Q9UKX7 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUP50Q9UKX7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUP50Q9UKX7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUP50Q9UKX7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUP50Q9UKX7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.09■□□□□ 0.65
NUP50Q9UKX7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
NUP50Q9UKX7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.09■□□□□ 0.65
NUP50Q9UKX7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NUP50Q9UKX7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.09■□□□□ 0.65
NUP50Q9UKX7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUP50Q9UKX7 AC141586.4-201ENST00000624558 1573 ntBASIC19.09■□□□□ 0.65
NUP50Q9UKX7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUP50Q9UKX7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUP50Q9UKX7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NUP50Q9UKX7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.08■□□□□ 0.65
NUP50Q9UKX7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NUP50Q9UKX7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NUP50Q9UKX7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
NUP50Q9UKX7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NUP50Q9UKX7 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NUP50Q9UKX7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NUP50Q9UKX7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
NUP50Q9UKX7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NUP50Q9UKX7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NUP50Q9UKX7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.08■□□□□ 0.64
NUP50Q9UKX7 AL356740.2-201ENST00000601559 647 ntBASIC19.08■□□□□ 0.64
NUP50Q9UKX7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.08■□□□□ 0.64
NUP50Q9UKX7 AL117332.1-201ENST00000622628 974 ntBASIC19.08■□□□□ 0.64
NUP50Q9UKX7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NUP50Q9UKX7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NUP50Q9UKX7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NUP50Q9UKX7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NUP50Q9UKX7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
NUP50Q9UKX7 SLC6A10P-202ENST00000431994 2058 ntBASIC19.07■□□□□ 0.64
NUP50Q9UKX7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUP50Q9UKX7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NUP50Q9UKX7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.07■□□□□ 0.64
NUP50Q9UKX7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUP50Q9UKX7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.07■□□□□ 0.64
NUP50Q9UKX7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
NUP50Q9UKX7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUP50Q9UKX7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUP50Q9UKX7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.07■□□□□ 0.64
NUP50Q9UKX7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NUP50Q9UKX7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
NUP50Q9UKX7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.07■□□□□ 0.64
NUP50Q9UKX7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUP50Q9UKX7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUP50Q9UKX7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NUP50Q9UKX7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.06■□□□□ 0.64
NUP50Q9UKX7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.06■□□□□ 0.64
NUP50Q9UKX7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUP50Q9UKX7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.06■□□□□ 0.64
NUP50Q9UKX7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
NUP50Q9UKX7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.06■□□□□ 0.64
NUP50Q9UKX7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUP50Q9UKX7 AC131281.2-201ENST00000520478 145 ntBASIC19.06■□□□□ 0.64
NUP50Q9UKX7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.06■□□□□ 0.64
NUP50Q9UKX7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.06■□□□□ 0.64
NUP50Q9UKX7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.06■□□□□ 0.64
NUP50Q9UKX7 MIR3621-201ENST00000580529 85 ntBASIC19.06■□□□□ 0.64
NUP50Q9UKX7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NUP50Q9UKX7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUP50Q9UKX7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUP50Q9UKX7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms