Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TREM2Q9NZC2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TREM2Q9NZC2 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TREM2Q9NZC2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TREM2Q9NZC2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.94■□□□□ 0.62
TREM2Q9NZC2 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
TREM2Q9NZC2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.94■□□□□ 0.62
TREM2Q9NZC2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TREM2Q9NZC2 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TREM2Q9NZC2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TREM2Q9NZC2 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.94■□□□□ 0.62
TREM2Q9NZC2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TREM2Q9NZC2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TREM2Q9NZC2 AC079630.1-202ENST00000618127 1840 ntBASIC18.93■□□□□ 0.62
TREM2Q9NZC2 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TREM2Q9NZC2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TREM2Q9NZC2 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TREM2Q9NZC2 EDA-201ENST00000338901 1233 ntBASIC18.93■□□□□ 0.62
TREM2Q9NZC2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.93■□□□□ 0.62
TREM2Q9NZC2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.93■□□□□ 0.62
TREM2Q9NZC2 AL031432.3-201ENST00000607698 485 ntBASIC18.93■□□□□ 0.62
TREM2Q9NZC2 AL355001.2-201ENST00000620617 1191 ntBASIC18.93■□□□□ 0.62
TREM2Q9NZC2 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TREM2Q9NZC2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TREM2Q9NZC2 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
TREM2Q9NZC2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TREM2Q9NZC2 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TREM2Q9NZC2 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TREM2Q9NZC2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TREM2Q9NZC2 SUDS3P1-201ENST00000505831 966 ntBASIC18.92■□□□□ 0.62
TREM2Q9NZC2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
TREM2Q9NZC2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.92■□□□□ 0.62
TREM2Q9NZC2 pRNA.6-201ENST00000610482 90 ntBASIC18.92■□□□□ 0.62
TREM2Q9NZC2 pRNA.5-201ENST00000612139 90 ntBASIC18.92■□□□□ 0.62
TREM2Q9NZC2 pRNA.11-201ENST00000618423 90 ntBASIC18.92■□□□□ 0.62
TREM2Q9NZC2 pRNA.13-201ENST00000619112 90 ntBASIC18.92■□□□□ 0.62
TREM2Q9NZC2 AC241377.3-202ENST00000626088 1088 ntBASIC18.92■□□□□ 0.62
TREM2Q9NZC2 AC241585.3-202ENST00000628937 1088 ntBASIC18.92■□□□□ 0.62
TREM2Q9NZC2 AC245100.8-202ENST00000629247 1058 ntBASIC18.92■□□□□ 0.62
TREM2Q9NZC2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TREM2Q9NZC2 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TREM2Q9NZC2 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TREM2Q9NZC2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.92■□□□□ 0.62
TREM2Q9NZC2 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TREM2Q9NZC2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.91■□□□□ 0.62
TREM2Q9NZC2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TREM2Q9NZC2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TREM2Q9NZC2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.91■□□□□ 0.62
TREM2Q9NZC2 ZNRF2P3-201ENST00000424200 374 ntBASIC18.91■□□□□ 0.62
TREM2Q9NZC2 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.91■□□□□ 0.62
TREM2Q9NZC2 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.91■□□□□ 0.62
TREM2Q9NZC2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TREM2Q9NZC2 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TREM2Q9NZC2 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.91■□□□□ 0.62
TREM2Q9NZC2 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TREM2Q9NZC2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.91■□□□□ 0.62
TREM2Q9NZC2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TREM2Q9NZC2 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TREM2Q9NZC2 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TREM2Q9NZC2 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.9■□□□□ 0.62
TREM2Q9NZC2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TREM2Q9NZC2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TREM2Q9NZC2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TREM2Q9NZC2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.9■□□□□ 0.62
TREM2Q9NZC2 MIR3181-201ENST00000578512 73 ntBASIC18.9■□□□□ 0.62
TREM2Q9NZC2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.9■□□□□ 0.62
TREM2Q9NZC2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.9■□□□□ 0.62
TREM2Q9NZC2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TREM2Q9NZC2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.89■□□□□ 0.62
TREM2Q9NZC2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
TREM2Q9NZC2 AC144652.1-201ENST00000609974 1624 ntBASIC18.89■□□□□ 0.62
TREM2Q9NZC2 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TREM2Q9NZC2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.89■□□□□ 0.61
TREM2Q9NZC2 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TREM2Q9NZC2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TREM2Q9NZC2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TREM2Q9NZC2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.89■□□□□ 0.61
TREM2Q9NZC2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TREM2Q9NZC2 AF213884.3-201ENST00000563833 479 ntBASIC18.89■□□□□ 0.61
TREM2Q9NZC2 MIR4767-201ENST00000582827 78 ntBASIC18.89■□□□□ 0.61
TREM2Q9NZC2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.89■□□□□ 0.61
TREM2Q9NZC2 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TREM2Q9NZC2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TREM2Q9NZC2 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TREM2Q9NZC2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
TREM2Q9NZC2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.89■□□□□ 0.61
TREM2Q9NZC2 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TREM2Q9NZC2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TREM2Q9NZC2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.89■□□□□ 0.61
TREM2Q9NZC2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.89■□□□□ 0.61
TREM2Q9NZC2 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TREM2Q9NZC2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
TREM2Q9NZC2 C9orf163-202ENST00000624034 2573 ntBASIC18.88■□□□□ 0.61
TREM2Q9NZC2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
TREM2Q9NZC2 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TREM2Q9NZC2 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TREM2Q9NZC2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TREM2Q9NZC2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.88■□□□□ 0.61
TREM2Q9NZC2 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.88■□□□□ 0.61
TREM2Q9NZC2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms