Protein–RNA interactions for Protein: Q9NYK5

MRPL39, 39S ribosomal protein L39, mitochondrial, humanhuman

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39Q9NYK5 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MRPL39Q9NYK5 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
MRPL39Q9NYK5 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.12■□□□□ 0.81
MRPL39Q9NYK5 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.12■□□□□ 0.81
MRPL39Q9NYK5 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MRPL39Q9NYK5 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MRPL39Q9NYK5 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MRPL39Q9NYK5 C9orf163-202ENST00000624034 2573 ntBASIC20.11■□□□□ 0.81
MRPL39Q9NYK5 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.11■□□□□ 0.81
MRPL39Q9NYK5 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MRPL39Q9NYK5 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
MRPL39Q9NYK5 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.11■□□□□ 0.81
MRPL39Q9NYK5 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.11■□□□□ 0.81
MRPL39Q9NYK5 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MRPL39Q9NYK5 AL353803.4-201ENST00000565882 1934 ntBASIC20.11■□□□□ 0.81
MRPL39Q9NYK5 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.11■□□□□ 0.81
MRPL39Q9NYK5 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MRPL39Q9NYK5 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
MRPL39Q9NYK5 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MRPL39Q9NYK5 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
MRPL39Q9NYK5 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MRPL39Q9NYK5 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.1■□□□□ 0.81
MRPL39Q9NYK5 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.1■□□□□ 0.81
MRPL39Q9NYK5 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MRPL39Q9NYK5 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.1■□□□□ 0.81
MRPL39Q9NYK5 MIR6724-1-201ENST00000616420 92 ntBASIC20.1■□□□□ 0.81
MRPL39Q9NYK5 MIR6724-2-201ENST00000616483 92 ntBASIC20.1■□□□□ 0.81
MRPL39Q9NYK5 MIR6724-4-201ENST00000617390 92 ntBASIC20.1■□□□□ 0.81
MRPL39Q9NYK5 MIR6724-3-201ENST00000622482 92 ntBASIC20.1■□□□□ 0.81
MRPL39Q9NYK5 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MRPL39Q9NYK5 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MRPL39Q9NYK5 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MRPL39Q9NYK5 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.09■□□□□ 0.81
MRPL39Q9NYK5 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
MRPL39Q9NYK5 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
MRPL39Q9NYK5 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MRPL39Q9NYK5 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.09■□□□□ 0.81
MRPL39Q9NYK5 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.09■□□□□ 0.81
MRPL39Q9NYK5 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
MRPL39Q9NYK5 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
MRPL39Q9NYK5 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MRPL39Q9NYK5 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.09■□□□□ 0.81
MRPL39Q9NYK5 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MRPL39Q9NYK5 FP325331.1-202ENST00000623531 1380 ntBASIC20.08■□□□□ 0.81
MRPL39Q9NYK5 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
MRPL39Q9NYK5 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.08■□□□□ 0.81
MRPL39Q9NYK5 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MRPL39Q9NYK5 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MRPL39Q9NYK5 GUSBP5-201ENST00000418136 578 ntBASIC20.08■□□□□ 0.81
MRPL39Q9NYK5 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
MRPL39Q9NYK5 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
MRPL39Q9NYK5 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.08■□□□□ 0.81
MRPL39Q9NYK5 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
MRPL39Q9NYK5 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MRPL39Q9NYK5 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
MRPL39Q9NYK5 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
MRPL39Q9NYK5 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MRPL39Q9NYK5 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MRPL39Q9NYK5 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MRPL39Q9NYK5 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.07■□□□□ 0.8
MRPL39Q9NYK5 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
MRPL39Q9NYK5 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
MRPL39Q9NYK5 AC009102.2-201ENST00000606772 1639 ntBASIC20.07■□□□□ 0.8
MRPL39Q9NYK5 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.07■□□□□ 0.8
MRPL39Q9NYK5 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.07■□□□□ 0.8
MRPL39Q9NYK5 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MRPL39Q9NYK5 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
MRPL39Q9NYK5 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MRPL39Q9NYK5 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
MRPL39Q9NYK5 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
MRPL39Q9NYK5 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.06■□□□□ 0.8
MRPL39Q9NYK5 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MRPL39Q9NYK5 KRT16P3-201ENST00000439127 1283 ntBASIC20.06■□□□□ 0.8
MRPL39Q9NYK5 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.06■□□□□ 0.8
MRPL39Q9NYK5 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MRPL39Q9NYK5 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MRPL39Q9NYK5 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.06■□□□□ 0.8
MRPL39Q9NYK5 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.06■□□□□ 0.8
MRPL39Q9NYK5 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MRPL39Q9NYK5 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.06■□□□□ 0.8
MRPL39Q9NYK5 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
MRPL39Q9NYK5 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
MRPL39Q9NYK5 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MRPL39Q9NYK5 LINC01529-204ENST00000636474 1715 ntBASIC20.05■□□□□ 0.8
MRPL39Q9NYK5 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MRPL39Q9NYK5 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MRPL39Q9NYK5 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
MRPL39Q9NYK5 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.05■□□□□ 0.8
MRPL39Q9NYK5 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.05■□□□□ 0.8
MRPL39Q9NYK5 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
MRPL39Q9NYK5 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MRPL39Q9NYK5 AC137767.1-201ENST00000602918 1920 ntBASIC20.05■□□□□ 0.8
MRPL39Q9NYK5 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
MRPL39Q9NYK5 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
MRPL39Q9NYK5 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
MRPL39Q9NYK5 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MRPL39Q9NYK5 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
MRPL39Q9NYK5 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MRPL39Q9NYK5 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MRPL39Q9NYK5 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 963.7 ms