Protein–RNA interactions for Protein: Q9HCG8

CWC22, Pre-mRNA-splicing factor CWC22 homolog, humanhuman

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CWC22Q9HCG8 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CWC22Q9HCG8 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CWC22Q9HCG8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC26.63■■□□□ 1.85
CWC22Q9HCG8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
CWC22Q9HCG8 AL031432.3-201ENST00000607698 485 ntBASIC26.63■■□□□ 1.85
CWC22Q9HCG8 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC26.63■■□□□ 1.85
CWC22Q9HCG8 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CWC22Q9HCG8 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC26.63■■□□□ 1.85
CWC22Q9HCG8 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CWC22Q9HCG8 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC26.63■■□□□ 1.85
CWC22Q9HCG8 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CWC22Q9HCG8 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
CWC22Q9HCG8 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC26.62■■□□□ 1.85
CWC22Q9HCG8 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CWC22Q9HCG8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CWC22Q9HCG8 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CWC22Q9HCG8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC26.62■■□□□ 1.85
CWC22Q9HCG8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CWC22Q9HCG8 DUX4L19-201ENST00000557448 1267 ntBASIC26.62■■□□□ 1.85
CWC22Q9HCG8 GRAMD4P4-201ENST00000613563 1115 ntBASIC26.62■■□□□ 1.85
CWC22Q9HCG8 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CWC22Q9HCG8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CWC22Q9HCG8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
CWC22Q9HCG8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CWC22Q9HCG8 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CWC22Q9HCG8 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CWC22Q9HCG8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
CWC22Q9HCG8 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CWC22Q9HCG8 AC105265.2-201ENST00000467189 838 ntBASIC26.61■■□□□ 1.85
CWC22Q9HCG8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC26.61■■□□□ 1.85
CWC22Q9HCG8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CWC22Q9HCG8 AC137767.1-201ENST00000602918 1920 ntBASIC26.61■■□□□ 1.85
CWC22Q9HCG8 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC26.6■■□□□ 1.85
CWC22Q9HCG8 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC26.6■■□□□ 1.85
CWC22Q9HCG8 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CWC22Q9HCG8 ESRRAP2-201ENST00000418437 1549 ntBASIC26.6■■□□□ 1.85
CWC22Q9HCG8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
CWC22Q9HCG8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
CWC22Q9HCG8 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC26.59■■□□□ 1.85
CWC22Q9HCG8 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CWC22Q9HCG8 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CWC22Q9HCG8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC26.59■■□□□ 1.85
CWC22Q9HCG8 MIR5787-201ENST00000611784 55 ntBASIC26.59■■□□□ 1.85
CWC22Q9HCG8 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
CWC22Q9HCG8 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
CWC22Q9HCG8 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
CWC22Q9HCG8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
CWC22Q9HCG8 AC131274.2-201ENST00000580697 1507 ntBASIC26.59■■□□□ 1.85
CWC22Q9HCG8 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CWC22Q9HCG8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CWC22Q9HCG8 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC26.58■■□□□ 1.85
CWC22Q9HCG8 AF213884.3-201ENST00000563833 479 ntBASIC26.58■■□□□ 1.85
CWC22Q9HCG8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC26.58■■□□□ 1.85
CWC22Q9HCG8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC26.58■■□□□ 1.85
CWC22Q9HCG8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC26.58■■□□□ 1.85
CWC22Q9HCG8 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CWC22Q9HCG8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
CWC22Q9HCG8 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
CWC22Q9HCG8 AC092171.4-201ENST00000609130 632 ntBASIC26.57■■□□□ 1.84
CWC22Q9HCG8 SYT6-210ENST00000641643 1587 ntBASIC26.57■■□□□ 1.84
CWC22Q9HCG8 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CWC22Q9HCG8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
CWC22Q9HCG8 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CWC22Q9HCG8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC26.56■■□□□ 1.84
CWC22Q9HCG8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CWC22Q9HCG8 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CWC22Q9HCG8 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
CWC22Q9HCG8 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CWC22Q9HCG8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC26.55■■□□□ 1.84
CWC22Q9HCG8 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CWC22Q9HCG8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC26.55■■□□□ 1.84
CWC22Q9HCG8 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
CWC22Q9HCG8 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC26.55■■□□□ 1.84
CWC22Q9HCG8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
CWC22Q9HCG8 REST-206ENST00000612429 1376 ntTSL 5 BASIC26.55■■□□□ 1.84
CWC22Q9HCG8 REST-207ENST00000616975 1370 ntTSL 5 BASIC26.55■■□□□ 1.84
CWC22Q9HCG8 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CWC22Q9HCG8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CWC22Q9HCG8 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC26.54■■□□□ 1.84
CWC22Q9HCG8 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CWC22Q9HCG8 AC242852.2-201ENST00000615738 1807 ntBASIC26.54■■□□□ 1.84
CWC22Q9HCG8 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CWC22Q9HCG8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CWC22Q9HCG8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC26.54■■□□□ 1.84
CWC22Q9HCG8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC26.54■■□□□ 1.84
CWC22Q9HCG8 AC026271.2-201ENST00000428091 497 ntBASIC26.54■■□□□ 1.84
CWC22Q9HCG8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CWC22Q9HCG8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC26.54■■□□□ 1.84
CWC22Q9HCG8 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
CWC22Q9HCG8 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
CWC22Q9HCG8 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CWC22Q9HCG8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CWC22Q9HCG8 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CWC22Q9HCG8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
CWC22Q9HCG8 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
CWC22Q9HCG8 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC26.53■■□□□ 1.84
CWC22Q9HCG8 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC26.53■■□□□ 1.84
CWC22Q9HCG8 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CWC22Q9HCG8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
CWC22Q9HCG8 COMT-203ENST00000403184 2217 ntTSL 2 BASIC26.53■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms