Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC241585.3-202ENST00000628937 1088 ntBASIC22.39■■□□□ 1.17
LRRC40Q9H9A6 AC245100.8-202ENST00000629247 1058 ntBASIC22.39■■□□□ 1.17
LRRC40Q9H9A6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.39■■□□□ 1.17
LRRC40Q9H9A6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.39■■□□□ 1.17
LRRC40Q9H9A6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
LRRC40Q9H9A6 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
LRRC40Q9H9A6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
LRRC40Q9H9A6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.38■■□□□ 1.17
LRRC40Q9H9A6 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
LRRC40Q9H9A6 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
LRRC40Q9H9A6 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
LRRC40Q9H9A6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
LRRC40Q9H9A6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.38■■□□□ 1.17
LRRC40Q9H9A6 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
LRRC40Q9H9A6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
LRRC40Q9H9A6 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC22.38■■□□□ 1.17
LRRC40Q9H9A6 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.38■■□□□ 1.17
LRRC40Q9H9A6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
LRRC40Q9H9A6 AC242852.2-201ENST00000615738 1807 ntBASIC22.38■■□□□ 1.17
LRRC40Q9H9A6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
LRRC40Q9H9A6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
LRRC40Q9H9A6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC22.37■■□□□ 1.17
LRRC40Q9H9A6 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
LRRC40Q9H9A6 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
LRRC40Q9H9A6 AC004687.1-201ENST00000579003 1625 ntBASIC22.37■■□□□ 1.17
LRRC40Q9H9A6 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
LRRC40Q9H9A6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
LRRC40Q9H9A6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
LRRC40Q9H9A6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
LRRC40Q9H9A6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
LRRC40Q9H9A6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
LRRC40Q9H9A6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.36■■□□□ 1.17
LRRC40Q9H9A6 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.36■■□□□ 1.17
LRRC40Q9H9A6 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
LRRC40Q9H9A6 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
LRRC40Q9H9A6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.36■■□□□ 1.17
LRRC40Q9H9A6 AL499627.2-201ENST00000606283 725 ntBASIC22.36■■□□□ 1.17
LRRC40Q9H9A6 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
LRRC40Q9H9A6 AC087742.1-201ENST00000575880 1738 ntBASIC22.36■■□□□ 1.17
LRRC40Q9H9A6 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
LRRC40Q9H9A6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
LRRC40Q9H9A6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
LRRC40Q9H9A6 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
LRRC40Q9H9A6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.35■■□□□ 1.17
LRRC40Q9H9A6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.35■■□□□ 1.17
LRRC40Q9H9A6 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
LRRC40Q9H9A6 AL356441.2-201ENST00000443009 864 ntBASIC22.35■■□□□ 1.17
LRRC40Q9H9A6 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
LRRC40Q9H9A6 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.35■■□□□ 1.17
LRRC40Q9H9A6 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
LRRC40Q9H9A6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LRRC40Q9H9A6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.34■■□□□ 1.17
LRRC40Q9H9A6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LRRC40Q9H9A6 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
LRRC40Q9H9A6 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LRRC40Q9H9A6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
LRRC40Q9H9A6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.34■■□□□ 1.17
LRRC40Q9H9A6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
LRRC40Q9H9A6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LRRC40Q9H9A6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LRRC40Q9H9A6 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
LRRC40Q9H9A6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.34■■□□□ 1.17
LRRC40Q9H9A6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LRRC40Q9H9A6 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
LRRC40Q9H9A6 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
LRRC40Q9H9A6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
LRRC40Q9H9A6 LINC01960-201ENST00000563759 1884 ntBASIC22.33■■□□□ 1.17
LRRC40Q9H9A6 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
LRRC40Q9H9A6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
LRRC40Q9H9A6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
LRRC40Q9H9A6 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
LRRC40Q9H9A6 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
LRRC40Q9H9A6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
LRRC40Q9H9A6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
LRRC40Q9H9A6 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
LRRC40Q9H9A6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.33■■□□□ 1.16
LRRC40Q9H9A6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
LRRC40Q9H9A6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
LRRC40Q9H9A6 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LRRC40Q9H9A6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
LRRC40Q9H9A6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
LRRC40Q9H9A6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.32■■□□□ 1.16
LRRC40Q9H9A6 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.32■■□□□ 1.16
LRRC40Q9H9A6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
LRRC40Q9H9A6 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.32■■□□□ 1.16
LRRC40Q9H9A6 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.32■■□□□ 1.16
LRRC40Q9H9A6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.32■■□□□ 1.16
LRRC40Q9H9A6 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LRRC40Q9H9A6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
LRRC40Q9H9A6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LRRC40Q9H9A6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
LRRC40Q9H9A6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRRC40Q9H9A6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRRC40Q9H9A6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRRC40Q9H9A6 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRRC40Q9H9A6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.31■■□□□ 1.16
LRRC40Q9H9A6 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.31■■□□□ 1.16
LRRC40Q9H9A6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.31■■□□□ 1.16
LRRC40Q9H9A6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.31■■□□□ 1.16
LRRC40Q9H9A6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms