Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 AL138724.1-201ENST00000606771 1088 ntBASIC32.58■■■□□ 2.81
SCAF1Q9H7N4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
SCAF1Q9H7N4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC32.58■■■□□ 2.81
SCAF1Q9H7N4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC32.58■■■□□ 2.81
SCAF1Q9H7N4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
SCAF1Q9H7N4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
SCAF1Q9H7N4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC32.57■■■□□ 2.8
SCAF1Q9H7N4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
SCAF1Q9H7N4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC32.57■■■□□ 2.8
SCAF1Q9H7N4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC32.57■■■□□ 2.8
SCAF1Q9H7N4 MPST-208ENST00000628507 698 ntTSL 5 BASIC32.57■■■□□ 2.8
SCAF1Q9H7N4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC32.57■■■□□ 2.8
SCAF1Q9H7N4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC32.57■■■□□ 2.8
SCAF1Q9H7N4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
SCAF1Q9H7N4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC32.57■■■□□ 2.8
SCAF1Q9H7N4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
SCAF1Q9H7N4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
SCAF1Q9H7N4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
SCAF1Q9H7N4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC32.56■■■□□ 2.8
SCAF1Q9H7N4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
SCAF1Q9H7N4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC32.56■■■□□ 2.8
SCAF1Q9H7N4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC32.56■■■□□ 2.8
SCAF1Q9H7N4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
SCAF1Q9H7N4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC32.56■■■□□ 2.8
SCAF1Q9H7N4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC32.56■■■□□ 2.8
SCAF1Q9H7N4 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
SCAF1Q9H7N4 AL355802.2-201ENST00000402069 882 ntBASIC32.55■■■□□ 2.8
SCAF1Q9H7N4 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC32.55■■■□□ 2.8
SCAF1Q9H7N4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC32.55■■■□□ 2.8
SCAF1Q9H7N4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC32.55■■■□□ 2.8
SCAF1Q9H7N4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC32.55■■■□□ 2.8
SCAF1Q9H7N4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC32.55■■■□□ 2.8
SCAF1Q9H7N4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC32.55■■■□□ 2.8
SCAF1Q9H7N4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC32.55■■■□□ 2.8
SCAF1Q9H7N4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
SCAF1Q9H7N4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC32.55■■■□□ 2.8
SCAF1Q9H7N4 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
SCAF1Q9H7N4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
SCAF1Q9H7N4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC32.54■■■□□ 2.8
SCAF1Q9H7N4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC32.54■■■□□ 2.8
SCAF1Q9H7N4 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
SCAF1Q9H7N4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC32.54■■■□□ 2.8
SCAF1Q9H7N4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
SCAF1Q9H7N4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC32.54■■■□□ 2.8
SCAF1Q9H7N4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC32.54■■■□□ 2.8
SCAF1Q9H7N4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
SCAF1Q9H7N4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC32.53■■■□□ 2.8
SCAF1Q9H7N4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC32.53■■■□□ 2.8
SCAF1Q9H7N4 EED-207ENST00000528180 1745 ntTSL 5 BASIC32.53■■■□□ 2.8
SCAF1Q9H7N4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
SCAF1Q9H7N4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC32.53■■■□□ 2.8
SCAF1Q9H7N4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
SCAF1Q9H7N4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
SCAF1Q9H7N4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
SCAF1Q9H7N4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC32.53■■■□□ 2.8
SCAF1Q9H7N4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
SCAF1Q9H7N4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
SCAF1Q9H7N4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC32.52■■■□□ 2.8
SCAF1Q9H7N4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
SCAF1Q9H7N4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC32.52■■■□□ 2.8
SCAF1Q9H7N4 AC080038.1-201ENST00000611274 1154 ntBASIC32.52■■■□□ 2.8
SCAF1Q9H7N4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC32.52■■■□□ 2.8
SCAF1Q9H7N4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC32.52■■■□□ 2.8
SCAF1Q9H7N4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
SCAF1Q9H7N4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC32.52■■■□□ 2.8
SCAF1Q9H7N4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
SCAF1Q9H7N4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
SCAF1Q9H7N4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC32.52■■■□□ 2.8
SCAF1Q9H7N4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC32.52■■■□□ 2.8
SCAF1Q9H7N4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
SCAF1Q9H7N4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
SCAF1Q9H7N4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
SCAF1Q9H7N4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
SCAF1Q9H7N4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC32.51■■■□□ 2.8
SCAF1Q9H7N4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
SCAF1Q9H7N4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC32.51■■■□□ 2.8
SCAF1Q9H7N4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC32.51■■■□□ 2.8
SCAF1Q9H7N4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC32.51■■■□□ 2.8
SCAF1Q9H7N4 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
SCAF1Q9H7N4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
SCAF1Q9H7N4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
SCAF1Q9H7N4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC32.51■■■□□ 2.79
SCAF1Q9H7N4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC32.51■■■□□ 2.79
SCAF1Q9H7N4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC32.51■■■□□ 2.79
SCAF1Q9H7N4 AC104771.1-201ENST00000603335 964 ntBASIC32.51■■■□□ 2.79
SCAF1Q9H7N4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
SCAF1Q9H7N4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
SCAF1Q9H7N4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC32.5■■■□□ 2.79
SCAF1Q9H7N4 WWC2-AS2-201ENST00000578387 2183 ntBASIC32.5■■■□□ 2.79
SCAF1Q9H7N4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
SCAF1Q9H7N4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
SCAF1Q9H7N4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
SCAF1Q9H7N4 HES6-206ENST00000409574 738 ntTSL 2 BASIC32.5■■■□□ 2.79
SCAF1Q9H7N4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
SCAF1Q9H7N4 AL137060.1-201ENST00000618151 2648 ntBASIC32.49■■■□□ 2.79
SCAF1Q9H7N4 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
SCAF1Q9H7N4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
SCAF1Q9H7N4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC32.49■■■□□ 2.79
SCAF1Q9H7N4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC32.49■■■□□ 2.79
SCAF1Q9H7N4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms