Protein–RNA interactions for Protein: Q9H741

C12orf49, UPF0454 protein C12orf49, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49Q9H741 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
C12orf49Q9H741 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.57■□□□□ 0.72
C12orf49Q9H741 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
C12orf49Q9H741 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
C12orf49Q9H741 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
C12orf49Q9H741 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.56■□□□□ 0.72
C12orf49Q9H741 TSPY26P-201ENST00000476365 1326 ntBASIC19.56■□□□□ 0.72
C12orf49Q9H741 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
C12orf49Q9H741 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.56■□□□□ 0.72
C12orf49Q9H741 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
C12orf49Q9H741 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
C12orf49Q9H741 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.56■□□□□ 0.72
C12orf49Q9H741 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
C12orf49Q9H741 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.56■□□□□ 0.72
C12orf49Q9H741 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.56■□□□□ 0.72
C12orf49Q9H741 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.56■□□□□ 0.72
C12orf49Q9H741 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.56■□□□□ 0.72
C12orf49Q9H741 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
C12orf49Q9H741 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
C12orf49Q9H741 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
C12orf49Q9H741 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
C12orf49Q9H741 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.56■□□□□ 0.72
C12orf49Q9H741 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
C12orf49Q9H741 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
C12orf49Q9H741 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
C12orf49Q9H741 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
C12orf49Q9H741 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
C12orf49Q9H741 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.55■□□□□ 0.72
C12orf49Q9H741 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
C12orf49Q9H741 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
C12orf49Q9H741 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
C12orf49Q9H741 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
C12orf49Q9H741 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.54■□□□□ 0.72
C12orf49Q9H741 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
C12orf49Q9H741 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
C12orf49Q9H741 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
C12orf49Q9H741 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
C12orf49Q9H741 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
C12orf49Q9H741 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
C12orf49Q9H741 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
C12orf49Q9H741 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
C12orf49Q9H741 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.54■□□□□ 0.72
C12orf49Q9H741 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
C12orf49Q9H741 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
C12orf49Q9H741 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.54■□□□□ 0.72
C12orf49Q9H741 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
C12orf49Q9H741 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.53■□□□□ 0.72
C12orf49Q9H741 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
C12orf49Q9H741 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
C12orf49Q9H741 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
C12orf49Q9H741 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.53■□□□□ 0.72
C12orf49Q9H741 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.53■□□□□ 0.72
C12orf49Q9H741 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.53■□□□□ 0.72
C12orf49Q9H741 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.53■□□□□ 0.72
C12orf49Q9H741 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
C12orf49Q9H741 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
C12orf49Q9H741 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
C12orf49Q9H741 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.53■□□□□ 0.72
C12orf49Q9H741 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
C12orf49Q9H741 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.52■□□□□ 0.72
C12orf49Q9H741 IRS3P-201ENST00000223076 1006 ntBASIC19.52■□□□□ 0.72
C12orf49Q9H741 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
C12orf49Q9H741 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
C12orf49Q9H741 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.52■□□□□ 0.72
C12orf49Q9H741 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
C12orf49Q9H741 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
C12orf49Q9H741 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
C12orf49Q9H741 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.51■□□□□ 0.71
C12orf49Q9H741 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
C12orf49Q9H741 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
C12orf49Q9H741 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
C12orf49Q9H741 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.51■□□□□ 0.71
C12orf49Q9H741 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.51■□□□□ 0.71
C12orf49Q9H741 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.51■□□□□ 0.71
C12orf49Q9H741 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
C12orf49Q9H741 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
C12orf49Q9H741 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.51■□□□□ 0.71
C12orf49Q9H741 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
C12orf49Q9H741 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
C12orf49Q9H741 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
C12orf49Q9H741 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
C12orf49Q9H741 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
C12orf49Q9H741 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
C12orf49Q9H741 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
C12orf49Q9H741 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
C12orf49Q9H741 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
C12orf49Q9H741 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.5■□□□□ 0.71
C12orf49Q9H741 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
C12orf49Q9H741 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
C12orf49Q9H741 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.5■□□□□ 0.71
C12orf49Q9H741 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.5■□□□□ 0.71
C12orf49Q9H741 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
C12orf49Q9H741 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
C12orf49Q9H741 IGHV3-19-201ENST00000521488 291 ntBASIC19.5■□□□□ 0.71
C12orf49Q9H741 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.5■□□□□ 0.71
C12orf49Q9H741 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.5■□□□□ 0.71
C12orf49Q9H741 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
C12orf49Q9H741 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
C12orf49Q9H741 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
C12orf49Q9H741 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms