Protein–RNA interactions for Protein: Q9H6I2

SOX17, Transcription factor SOX-17, humanhuman

Predicted RBP Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17Q9H6I2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.31■■□□□ 1
SOX17Q9H6I2 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SOX17Q9H6I2 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.3■■□□□ 1
SOX17Q9H6I2 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
SOX17Q9H6I2 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
SOX17Q9H6I2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.3■■□□□ 1
SOX17Q9H6I2 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.3■■□□□ 1
SOX17Q9H6I2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
SOX17Q9H6I2 SYT6-210ENST00000641643 1587 ntBASIC21.3■■□□□ 1
SOX17Q9H6I2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.3■■□□□ 1
SOX17Q9H6I2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SOX17Q9H6I2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.3■■□□□ 1
SOX17Q9H6I2 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SOX17Q9H6I2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.29■■□□□ 1
SOX17Q9H6I2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.29■■□□□ 1
SOX17Q9H6I2 C17orf82-201ENST00000623772 1530 ntBASIC21.29■■□□□ 1
SOX17Q9H6I2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.29■■□□□ 1
SOX17Q9H6I2 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SOX17Q9H6I2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SOX17Q9H6I2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.29■■□□□ 1
SOX17Q9H6I2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.29■■□□□ 1
SOX17Q9H6I2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.29■■□□□ 1
SOX17Q9H6I2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.29■■□□□ 1
SOX17Q9H6I2 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.29■■□□□ 1
SOX17Q9H6I2 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SOX17Q9H6I2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SOX17Q9H6I2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.29■■□□□ 1
SOX17Q9H6I2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.29■■□□□ 1
SOX17Q9H6I2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.29■■□□□ 1
SOX17Q9H6I2 DUX4L19-201ENST00000557448 1267 ntBASIC21.29■■□□□ 1
SOX17Q9H6I2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SOX17Q9H6I2 AC133561.4-201ENST00000566112 224 ntBASIC21.29■■□□□ 1
SOX17Q9H6I2 AC092171.4-201ENST00000609130 632 ntBASIC21.29■■□□□ 1
SOX17Q9H6I2 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.29■■□□□ 1
SOX17Q9H6I2 AC007375.3-201ENST00000600936 2314 ntBASIC21.29■■□□□ 1
SOX17Q9H6I2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SOX17Q9H6I2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SOX17Q9H6I2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SOX17Q9H6I2 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SOX17Q9H6I2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SOX17Q9H6I2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.28■■□□□ 1
SOX17Q9H6I2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SOX17Q9H6I2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SOX17Q9H6I2 ANOS2P-203ENST00000472227 1816 ntBASIC21.28■■□□□ 1
SOX17Q9H6I2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.28■■□□□ 1
SOX17Q9H6I2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SOX17Q9H6I2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SOX17Q9H6I2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.28■■□□□ 1
SOX17Q9H6I2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.28■■□□□ 1
SOX17Q9H6I2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SOX17Q9H6I2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SOX17Q9H6I2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.28■■□□□ 1
SOX17Q9H6I2 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.28■■□□□ 1
SOX17Q9H6I2 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SOX17Q9H6I2 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.27■■□□□ 1
SOX17Q9H6I2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SOX17Q9H6I2 LINC00526-201ENST00000581067 1875 ntBASIC21.27■■□□□ 1
SOX17Q9H6I2 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SOX17Q9H6I2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SOX17Q9H6I2 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.27■■□□□ 1
SOX17Q9H6I2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.27■■□□□ 1
SOX17Q9H6I2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.27■■□□□ 1
SOX17Q9H6I2 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.27■■□□□ 1
SOX17Q9H6I2 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
SOX17Q9H6I2 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.27■■□□□ 1
SOX17Q9H6I2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.27■■□□□ 1
SOX17Q9H6I2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.27■■□□□ 1
SOX17Q9H6I2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SOX17Q9H6I2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SOX17Q9H6I2 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SOX17Q9H6I2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
SOX17Q9H6I2 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SOX17Q9H6I2 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SOX17Q9H6I2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SOX17Q9H6I2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.26■□□□□ 0.99
SOX17Q9H6I2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SOX17Q9H6I2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SOX17Q9H6I2 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
SOX17Q9H6I2 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
SOX17Q9H6I2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SOX17Q9H6I2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
SOX17Q9H6I2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SOX17Q9H6I2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SOX17Q9H6I2 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SOX17Q9H6I2 SERBP1P1-201ENST00000396021 1160 ntBASIC21.25■□□□□ 0.99
SOX17Q9H6I2 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.25■□□□□ 0.99
SOX17Q9H6I2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.25■□□□□ 0.99
SOX17Q9H6I2 AC142381.2-201ENST00000566120 298 ntBASIC21.25■□□□□ 0.99
SOX17Q9H6I2 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SOX17Q9H6I2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SOX17Q9H6I2 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SOX17Q9H6I2 GUSBP5-202ENST00000510805 1989 ntBASIC21.25■□□□□ 0.99
SOX17Q9H6I2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.24■□□□□ 0.99
SOX17Q9H6I2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SOX17Q9H6I2 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SOX17Q9H6I2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.24■□□□□ 0.99
SOX17Q9H6I2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SOX17Q9H6I2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SOX17Q9H6I2 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SOX17Q9H6I2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms