Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALX4Q9H161 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ALX4Q9H161 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ALX4Q9H161 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALX4Q9H161 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ALX4Q9H161 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALX4Q9H161 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ALX4Q9H161 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
ALX4Q9H161 AC139795.1-202ENST00000500444 432 ntBASIC18.6■□□□□ 0.57
ALX4Q9H161 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALX4Q9H161 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ALX4Q9H161 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALX4Q9H161 AC087742.1-201ENST00000575880 1738 ntBASIC18.6■□□□□ 0.57
ALX4Q9H161 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.6■□□□□ 0.57
ALX4Q9H161 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALX4Q9H161 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ALX4Q9H161 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALX4Q9H161 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.59■□□□□ 0.57
ALX4Q9H161 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
ALX4Q9H161 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ALX4Q9H161 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ALX4Q9H161 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ALX4Q9H161 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ALX4Q9H161 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ALX4Q9H161 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ALX4Q9H161 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ALX4Q9H161 AC010542.4-201ENST00000563151 1910 ntBASIC18.59■□□□□ 0.57
ALX4Q9H161 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ALX4Q9H161 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ALX4Q9H161 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.59■□□□□ 0.57
ALX4Q9H161 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.59■□□□□ 0.57
ALX4Q9H161 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ALX4Q9H161 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.59■□□□□ 0.57
ALX4Q9H161 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ALX4Q9H161 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.58■□□□□ 0.57
ALX4Q9H161 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ALX4Q9H161 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ALX4Q9H161 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ALX4Q9H161 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ALX4Q9H161 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
ALX4Q9H161 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
ALX4Q9H161 AC010980.1-201ENST00000587192 1142 ntBASIC18.58■□□□□ 0.56
ALX4Q9H161 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
ALX4Q9H161 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ALX4Q9H161 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ALX4Q9H161 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ALX4Q9H161 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.58■□□□□ 0.56
ALX4Q9H161 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.58■□□□□ 0.56
ALX4Q9H161 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.57■□□□□ 0.56
ALX4Q9H161 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ALX4Q9H161 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
ALX4Q9H161 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ALX4Q9H161 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ALX4Q9H161 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ALX4Q9H161 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ALX4Q9H161 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.57■□□□□ 0.56
ALX4Q9H161 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ALX4Q9H161 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ALX4Q9H161 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ALX4Q9H161 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ALX4Q9H161 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ALX4Q9H161 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ALX4Q9H161 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.56■□□□□ 0.56
ALX4Q9H161 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ALX4Q9H161 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ALX4Q9H161 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ALX4Q9H161 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.56■□□□□ 0.56
ALX4Q9H161 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
ALX4Q9H161 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ALX4Q9H161 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ALX4Q9H161 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ALX4Q9H161 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ALX4Q9H161 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ALX4Q9H161 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ALX4Q9H161 AC005229.4-201ENST00000610085 2198 ntBASIC18.55■□□□□ 0.56
ALX4Q9H161 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ALX4Q9H161 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ALX4Q9H161 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
ALX4Q9H161 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ALX4Q9H161 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ALX4Q9H161 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.55■□□□□ 0.56
ALX4Q9H161 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.55■□□□□ 0.56
ALX4Q9H161 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
ALX4Q9H161 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ALX4Q9H161 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.55■□□□□ 0.56
ALX4Q9H161 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ALX4Q9H161 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ALX4Q9H161 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
ALX4Q9H161 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ALX4Q9H161 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ALX4Q9H161 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ALX4Q9H161 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
ALX4Q9H161 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.54■□□□□ 0.56
ALX4Q9H161 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ALX4Q9H161 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.54■□□□□ 0.56
ALX4Q9H161 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
ALX4Q9H161 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ALX4Q9H161 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ALX4Q9H161 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ALX4Q9H161 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms