Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CNTNAP3Q9BZ76 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.15■□□□□ 0.98
CNTNAP3Q9BZ76 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.15■□□□□ 0.98
CNTNAP3Q9BZ76 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.15■□□□□ 0.98
CNTNAP3Q9BZ76 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.15■□□□□ 0.98
CNTNAP3Q9BZ76 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.15■□□□□ 0.98
CNTNAP3Q9BZ76 AC142472.1-201ENST00000612013 1741 ntBASIC21.15■□□□□ 0.98
CNTNAP3Q9BZ76 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.15■□□□□ 0.98
CNTNAP3Q9BZ76 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CNTNAP3Q9BZ76 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CNTNAP3Q9BZ76 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CNTNAP3Q9BZ76 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNTNAP3Q9BZ76 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CNTNAP3Q9BZ76 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CNTNAP3Q9BZ76 ESRRAP1-201ENST00000400596 1257 ntBASIC21.14■□□□□ 0.97
CNTNAP3Q9BZ76 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CNTNAP3Q9BZ76 AC105036.2-201ENST00000569468 176 ntBASIC21.14■□□□□ 0.97
CNTNAP3Q9BZ76 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.14■□□□□ 0.97
CNTNAP3Q9BZ76 REXO1L12P-201ENST00000622156 912 ntBASIC21.14■□□□□ 0.97
CNTNAP3Q9BZ76 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CNTNAP3Q9BZ76 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CNTNAP3Q9BZ76 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CNTNAP3Q9BZ76 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.13■□□□□ 0.97
CNTNAP3Q9BZ76 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNTNAP3Q9BZ76 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNTNAP3Q9BZ76 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.13■□□□□ 0.97
CNTNAP3Q9BZ76 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNTNAP3Q9BZ76 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNTNAP3Q9BZ76 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNTNAP3Q9BZ76 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CNTNAP3Q9BZ76 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.13■□□□□ 0.97
CNTNAP3Q9BZ76 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CNTNAP3Q9BZ76 LINC01023-201ENST00000606054 436 ntBASIC21.13■□□□□ 0.97
CNTNAP3Q9BZ76 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CNTNAP3Q9BZ76 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.13■□□□□ 0.97
CNTNAP3Q9BZ76 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.12■□□□□ 0.97
CNTNAP3Q9BZ76 MIR4758-201ENST00000577688 71 ntBASIC21.12■□□□□ 0.97
CNTNAP3Q9BZ76 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.12■□□□□ 0.97
CNTNAP3Q9BZ76 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNTNAP3Q9BZ76 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CNTNAP3Q9BZ76 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CNTNAP3Q9BZ76 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNTNAP3Q9BZ76 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CNTNAP3Q9BZ76 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNTNAP3Q9BZ76 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
CNTNAP3Q9BZ76 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.11■□□□□ 0.97
CNTNAP3Q9BZ76 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.11■□□□□ 0.97
CNTNAP3Q9BZ76 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CNTNAP3Q9BZ76 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNTNAP3Q9BZ76 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CNTNAP3Q9BZ76 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CNTNAP3Q9BZ76 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.1■□□□□ 0.97
CNTNAP3Q9BZ76 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CNTNAP3Q9BZ76 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CNTNAP3Q9BZ76 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.1■□□□□ 0.97
CNTNAP3Q9BZ76 AC006058.3-201ENST00000606217 1069 ntBASIC21.1■□□□□ 0.97
CNTNAP3Q9BZ76 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CNTNAP3Q9BZ76 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CNTNAP3Q9BZ76 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.09■□□□□ 0.97
CNTNAP3Q9BZ76 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CNTNAP3Q9BZ76 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.09■□□□□ 0.97
CNTNAP3Q9BZ76 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CNTNAP3Q9BZ76 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNTNAP3Q9BZ76 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNTNAP3Q9BZ76 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.09■□□□□ 0.97
CNTNAP3Q9BZ76 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
CNTNAP3Q9BZ76 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.09■□□□□ 0.97
CNTNAP3Q9BZ76 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.09■□□□□ 0.97
CNTNAP3Q9BZ76 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.09■□□□□ 0.97
CNTNAP3Q9BZ76 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CNTNAP3Q9BZ76 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CNTNAP3Q9BZ76 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CNTNAP3Q9BZ76 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CNTNAP3Q9BZ76 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.08■□□□□ 0.97
CNTNAP3Q9BZ76 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CNTNAP3Q9BZ76 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CNTNAP3Q9BZ76 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CNTNAP3Q9BZ76 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.08■□□□□ 0.97
CNTNAP3Q9BZ76 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CNTNAP3Q9BZ76 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CNTNAP3Q9BZ76 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CNTNAP3Q9BZ76 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CNTNAP3Q9BZ76 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
CNTNAP3Q9BZ76 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CNTNAP3Q9BZ76 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.07■□□□□ 0.96
CNTNAP3Q9BZ76 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.07■□□□□ 0.96
CNTNAP3Q9BZ76 AC128676.1-201ENST00000454392 318 ntBASIC21.07■□□□□ 0.96
CNTNAP3Q9BZ76 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.07■□□□□ 0.96
CNTNAP3Q9BZ76 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CNTNAP3Q9BZ76 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNTNAP3Q9BZ76 AC133637.1-201ENST00000624115 1537 ntBASIC21.07■□□□□ 0.96
CNTNAP3Q9BZ76 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CNTNAP3Q9BZ76 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CNTNAP3Q9BZ76 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNTNAP3Q9BZ76 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNTNAP3Q9BZ76 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CNTNAP3Q9BZ76 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNTNAP3Q9BZ76 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CNTNAP3Q9BZ76 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CNTNAP3Q9BZ76 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms