Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP3-1Q9BYR8 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
KRTAP3-1Q9BYR8 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP3-1Q9BYR8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP3-1Q9BYR8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
KRTAP3-1Q9BYR8 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC11.2□□□□□ -0.62
KRTAP3-1Q9BYR8 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP3-1Q9BYR8 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP3-1Q9BYR8 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC11.2□□□□□ -0.62
KRTAP3-1Q9BYR8 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC11.2□□□□□ -0.62
KRTAP3-1Q9BYR8 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC11.2□□□□□ -0.62
KRTAP3-1Q9BYR8 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC11.2□□□□□ -0.62
KRTAP3-1Q9BYR8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP3-1Q9BYR8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
KRTAP3-1Q9BYR8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC11.2□□□□□ -0.62
KRTAP3-1Q9BYR8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP3-1Q9BYR8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
KRTAP3-1Q9BYR8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
KRTAP3-1Q9BYR8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP3-1Q9BYR8 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC11.19□□□□□ -0.62
KRTAP3-1Q9BYR8 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC11.19□□□□□ -0.62
KRTAP3-1Q9BYR8 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP3-1Q9BYR8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP3-1Q9BYR8 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
KRTAP3-1Q9BYR8 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP3-1Q9BYR8 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP3-1Q9BYR8 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP3-1Q9BYR8 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP3-1Q9BYR8 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC11.19□□□□□ -0.62
KRTAP3-1Q9BYR8 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC11.19□□□□□ -0.62
KRTAP3-1Q9BYR8 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP3-1Q9BYR8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC11.19□□□□□ -0.62
KRTAP3-1Q9BYR8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP3-1Q9BYR8 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP3-1Q9BYR8 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP3-1Q9BYR8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC11.19□□□□□ -0.62
KRTAP3-1Q9BYR8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP3-1Q9BYR8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
KRTAP3-1Q9BYR8 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC11.19□□□□□ -0.62
KRTAP3-1Q9BYR8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
KRTAP3-1Q9BYR8 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
KRTAP3-1Q9BYR8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC11.18□□□□□ -0.62
KRTAP3-1Q9BYR8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
KRTAP3-1Q9BYR8 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
KRTAP3-1Q9BYR8 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC11.18□□□□□ -0.62
KRTAP3-1Q9BYR8 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
KRTAP3-1Q9BYR8 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
KRTAP3-1Q9BYR8 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC11.18□□□□□ -0.62
KRTAP3-1Q9BYR8 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
KRTAP3-1Q9BYR8 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
KRTAP3-1Q9BYR8 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC11.18□□□□□ -0.62
KRTAP3-1Q9BYR8 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
KRTAP3-1Q9BYR8 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
KRTAP3-1Q9BYR8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
KRTAP3-1Q9BYR8 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
KRTAP3-1Q9BYR8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
KRTAP3-1Q9BYR8 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
KRTAP3-1Q9BYR8 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
KRTAP3-1Q9BYR8 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
KRTAP3-1Q9BYR8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
KRTAP3-1Q9BYR8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
KRTAP3-1Q9BYR8 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
KRTAP3-1Q9BYR8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
KRTAP3-1Q9BYR8 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
KRTAP3-1Q9BYR8 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
KRTAP3-1Q9BYR8 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
KRTAP3-1Q9BYR8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC11.17□□□□□ -0.62
KRTAP3-1Q9BYR8 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
KRTAP3-1Q9BYR8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
KRTAP3-1Q9BYR8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
KRTAP3-1Q9BYR8 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
KRTAP3-1Q9BYR8 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC11.17□□□□□ -0.62
KRTAP3-1Q9BYR8 AC139795.1-202ENST00000500444 432 ntBASIC11.17□□□□□ -0.62
KRTAP3-1Q9BYR8 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
KRTAP3-1Q9BYR8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC11.17□□□□□ -0.62
KRTAP3-1Q9BYR8 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
KRTAP3-1Q9BYR8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC11.17□□□□□ -0.62
KRTAP3-1Q9BYR8 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
KRTAP3-1Q9BYR8 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
KRTAP3-1Q9BYR8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
KRTAP3-1Q9BYR8 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC11.17□□□□□ -0.62
KRTAP3-1Q9BYR8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
KRTAP3-1Q9BYR8 REST-206ENST00000612429 1376 ntTSL 5 BASIC11.16□□□□□ -0.62
KRTAP3-1Q9BYR8 REST-207ENST00000616975 1370 ntTSL 5 BASIC11.16□□□□□ -0.62
KRTAP3-1Q9BYR8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-1Q9BYR8 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC11.16□□□□□ -0.62
KRTAP3-1Q9BYR8 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC11.16□□□□□ -0.62
KRTAP3-1Q9BYR8 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC11.16□□□□□ -0.62
KRTAP3-1Q9BYR8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
KRTAP3-1Q9BYR8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC11.16□□□□□ -0.62
KRTAP3-1Q9BYR8 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-1Q9BYR8 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-1Q9BYR8 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-1Q9BYR8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-1Q9BYR8 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-1Q9BYR8 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC11.16□□□□□ -0.62
KRTAP3-1Q9BYR8 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
KRTAP3-1Q9BYR8 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
KRTAP3-1Q9BYR8 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC11.16□□□□□ -0.62
KRTAP3-1Q9BYR8 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms