Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
LCE3DQ9BYE3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
LCE3DQ9BYE3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC5.95□□□□□ -1.46
LCE3DQ9BYE3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LCE3DQ9BYE3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC5.95□□□□□ -1.46
LCE3DQ9BYE3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LCE3DQ9BYE3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LCE3DQ9BYE3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LCE3DQ9BYE3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LCE3DQ9BYE3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
LCE3DQ9BYE3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
LCE3DQ9BYE3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
LCE3DQ9BYE3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
LCE3DQ9BYE3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 FBXW4P1-201ENST00000426721 2239 ntBASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 HLA-V-202ENST00000446817 847 ntBASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
LCE3DQ9BYE3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LCE3DQ9BYE3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LCE3DQ9BYE3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC5.93□□□□□ -1.46
LCE3DQ9BYE3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LCE3DQ9BYE3 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
LCE3DQ9BYE3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LCE3DQ9BYE3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC5.93□□□□□ -1.46
LCE3DQ9BYE3 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LCE3DQ9BYE3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LCE3DQ9BYE3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
LCE3DQ9BYE3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
LCE3DQ9BYE3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC5.93□□□□□ -1.46
LCE3DQ9BYE3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LCE3DQ9BYE3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LCE3DQ9BYE3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
LCE3DQ9BYE3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LCE3DQ9BYE3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
LCE3DQ9BYE3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC5.93□□□□□ -1.46
LCE3DQ9BYE3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
LCE3DQ9BYE3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LCE3DQ9BYE3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LCE3DQ9BYE3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
LCE3DQ9BYE3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LCE3DQ9BYE3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LCE3DQ9BYE3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
LCE3DQ9BYE3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
LCE3DQ9BYE3 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
LCE3DQ9BYE3 HES6-205ENST00000409356 528 ntTSL 2 BASIC5.93□□□□□ -1.46
LCE3DQ9BYE3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC5.93□□□□□ -1.46
LCE3DQ9BYE3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
LCE3DQ9BYE3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
LCE3DQ9BYE3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC5.93□□□□□ -1.46
LCE3DQ9BYE3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms