Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LITAFQ99732 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LITAFQ99732 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LITAFQ99732 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC14.72□□□□□ -0.05
LITAFQ99732 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC14.72□□□□□ -0.05
LITAFQ99732 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC14.72□□□□□ -0.05
LITAFQ99732 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LITAFQ99732 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LITAFQ99732 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LITAFQ99732 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
LITAFQ99732 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LITAFQ99732 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LITAFQ99732 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LITAFQ99732 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LITAFQ99732 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
LITAFQ99732 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LITAFQ99732 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LITAFQ99732 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC14.71□□□□□ -0.05
LITAFQ99732 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LITAFQ99732 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC14.71□□□□□ -0.05
LITAFQ99732 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC14.71□□□□□ -0.05
LITAFQ99732 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC14.71□□□□□ -0.05
LITAFQ99732 SSSCA1-AS1-201ENST00000567594 614 ntBASIC14.71□□□□□ -0.05
LITAFQ99732 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
LITAFQ99732 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC14.71□□□□□ -0.05
LITAFQ99732 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
LITAFQ99732 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
LITAFQ99732 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.06
LITAFQ99732 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
LITAFQ99732 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LITAFQ99732 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
LITAFQ99732 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
LITAFQ99732 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LITAFQ99732 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LITAFQ99732 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LITAFQ99732 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC14.7□□□□□ -0.06
LITAFQ99732 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LITAFQ99732 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC14.7□□□□□ -0.06
LITAFQ99732 AF106564.1-201ENST00000607058 2553 ntBASIC14.7□□□□□ -0.06
LITAFQ99732 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LITAFQ99732 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LITAFQ99732 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC14.7□□□□□ -0.06
LITAFQ99732 AC092296.2-201ENST00000589470 999 ntBASIC14.7□□□□□ -0.06
LITAFQ99732 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LITAFQ99732 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LITAFQ99732 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
LITAFQ99732 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LITAFQ99732 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LITAFQ99732 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC14.7□□□□□ -0.06
LITAFQ99732 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LITAFQ99732 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC14.69□□□□□ -0.06
LITAFQ99732 FEM1AP4-201ENST00000443167 1987 ntBASIC14.69□□□□□ -0.06
LITAFQ99732 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC14.69□□□□□ -0.06
LITAFQ99732 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LITAFQ99732 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LITAFQ99732 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LITAFQ99732 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LITAFQ99732 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LITAFQ99732 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
LITAFQ99732 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LITAFQ99732 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LITAFQ99732 GOLGA2P6-201ENST00000340929 2049 ntBASIC14.69□□□□□ -0.06
LITAFQ99732 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LITAFQ99732 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LITAFQ99732 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
LITAFQ99732 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LITAFQ99732 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LITAFQ99732 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC14.68□□□□□ -0.06
LITAFQ99732 Z98882.1-201ENST00000622160 2253 ntBASIC14.68□□□□□ -0.06
LITAFQ99732 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
LITAFQ99732 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
LITAFQ99732 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LITAFQ99732 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
LITAFQ99732 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
LITAFQ99732 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LITAFQ99732 AGPS-202ENST00000409888 815 ntTSL 4 BASIC14.68□□□□□ -0.06
LITAFQ99732 STK32C-205ENST00000456004 607 ntTSL 2 BASIC14.68□□□□□ -0.06
LITAFQ99732 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LITAFQ99732 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC14.68□□□□□ -0.06
LITAFQ99732 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LITAFQ99732 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LITAFQ99732 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LITAFQ99732 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LITAFQ99732 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
LITAFQ99732 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC14.68□□□□□ -0.06
LITAFQ99732 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LITAFQ99732 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LITAFQ99732 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LITAFQ99732 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LITAFQ99732 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LITAFQ99732 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LITAFQ99732 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LITAFQ99732 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LITAFQ99732 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC14.67□□□□□ -0.06
LITAFQ99732 RAP2CP1-202ENST00000605179 643 ntBASIC14.67□□□□□ -0.06
LITAFQ99732 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LITAFQ99732 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LITAFQ99732 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LITAFQ99732 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC14.67□□□□□ -0.06
LITAFQ99732 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms