Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.19■□□□□ 0.98
RNF31Q96EP0 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.19■□□□□ 0.98
RNF31Q96EP0 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.19■□□□□ 0.98
RNF31Q96EP0 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.19■□□□□ 0.98
RNF31Q96EP0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.19■□□□□ 0.98
RNF31Q96EP0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RNF31Q96EP0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF31Q96EP0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF31Q96EP0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF31Q96EP0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF31Q96EP0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF31Q96EP0 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.18■□□□□ 0.98
RNF31Q96EP0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF31Q96EP0 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.18■□□□□ 0.98
RNF31Q96EP0 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.18■□□□□ 0.98
RNF31Q96EP0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RNF31Q96EP0 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF31Q96EP0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RNF31Q96EP0 IKBKGP1-201ENST00000612193 1073 ntBASIC21.18■□□□□ 0.98
RNF31Q96EP0 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.18■□□□□ 0.98
RNF31Q96EP0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RNF31Q96EP0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RNF31Q96EP0 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RNF31Q96EP0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF31Q96EP0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF31Q96EP0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF31Q96EP0 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RNF31Q96EP0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RNF31Q96EP0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF31Q96EP0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
RNF31Q96EP0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF31Q96EP0 AC079834.2-201ENST00000609776 1949 ntBASIC21.17■□□□□ 0.98
RNF31Q96EP0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF31Q96EP0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF31Q96EP0 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RNF31Q96EP0 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RNF31Q96EP0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
RNF31Q96EP0 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF31Q96EP0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF31Q96EP0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RNF31Q96EP0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF31Q96EP0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF31Q96EP0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF31Q96EP0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
RNF31Q96EP0 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
RNF31Q96EP0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF31Q96EP0 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.16■□□□□ 0.98
RNF31Q96EP0 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF31Q96EP0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RNF31Q96EP0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF31Q96EP0 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF31Q96EP0 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF31Q96EP0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF31Q96EP0 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF31Q96EP0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF31Q96EP0 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RNF31Q96EP0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
RNF31Q96EP0 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF31Q96EP0 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF31Q96EP0 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF31Q96EP0 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF31Q96EP0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.15■□□□□ 0.98
RNF31Q96EP0 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.15■□□□□ 0.98
RNF31Q96EP0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.15■□□□□ 0.98
RNF31Q96EP0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF31Q96EP0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF31Q96EP0 AC079630.1-202ENST00000618127 1840 ntBASIC21.15■□□□□ 0.98
RNF31Q96EP0 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF31Q96EP0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.15■□□□□ 0.98
RNF31Q96EP0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.15■□□□□ 0.98
RNF31Q96EP0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF31Q96EP0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF31Q96EP0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF31Q96EP0 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF31Q96EP0 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF31Q96EP0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RNF31Q96EP0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF31Q96EP0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF31Q96EP0 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF31Q96EP0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
RNF31Q96EP0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
RNF31Q96EP0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
RNF31Q96EP0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF31Q96EP0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.14■□□□□ 0.97
RNF31Q96EP0 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF31Q96EP0 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF31Q96EP0 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF31Q96EP0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF31Q96EP0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF31Q96EP0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF31Q96EP0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF31Q96EP0 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF31Q96EP0 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF31Q96EP0 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF31Q96EP0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.13■□□□□ 0.97
RNF31Q96EP0 AC144652.1-201ENST00000609974 1624 ntBASIC21.13■□□□□ 0.97
RNF31Q96EP0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF31Q96EP0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
RNF31Q96EP0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF31Q96EP0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms