Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC58Q96CX6 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.97■□□□□ 0.95
LRRC58Q96CX6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC58Q96CX6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
LRRC58Q96CX6 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC58Q96CX6 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.97■□□□□ 0.95
LRRC58Q96CX6 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC58Q96CX6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
LRRC58Q96CX6 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.97■□□□□ 0.95
LRRC58Q96CX6 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.97■□□□□ 0.95
LRRC58Q96CX6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC58Q96CX6 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LRRC58Q96CX6 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC58Q96CX6 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC58Q96CX6 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC58Q96CX6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC58Q96CX6 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
LRRC58Q96CX6 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC58Q96CX6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC58Q96CX6 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC58Q96CX6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC58Q96CX6 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.96■□□□□ 0.95
LRRC58Q96CX6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
LRRC58Q96CX6 BHLHE23-202ENST00000612929 1109 ntBASIC20.96■□□□□ 0.95
LRRC58Q96CX6 PVT1_1.1-201ENST00000615125 194 ntBASIC20.96■□□□□ 0.95
LRRC58Q96CX6 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.96■□□□□ 0.95
LRRC58Q96CX6 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
LRRC58Q96CX6 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC58Q96CX6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC58Q96CX6 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.96■□□□□ 0.95
LRRC58Q96CX6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC58Q96CX6 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC58Q96CX6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC58Q96CX6 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LRRC58Q96CX6 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC58Q96CX6 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC58Q96CX6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC58Q96CX6 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
LRRC58Q96CX6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC58Q96CX6 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC58Q96CX6 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC58Q96CX6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC58Q96CX6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC58Q96CX6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
LRRC58Q96CX6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.95■□□□□ 0.94
LRRC58Q96CX6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC58Q96CX6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.95■□□□□ 0.94
LRRC58Q96CX6 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC58Q96CX6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LRRC58Q96CX6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
LRRC58Q96CX6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.94■□□□□ 0.94
LRRC58Q96CX6 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRC58Q96CX6 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRC58Q96CX6 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.94■□□□□ 0.94
LRRC58Q96CX6 AC074183.2-201ENST00000623112 922 ntBASIC20.94■□□□□ 0.94
LRRC58Q96CX6 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRC58Q96CX6 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LRRC58Q96CX6 AC010542.4-201ENST00000563151 1910 ntBASIC20.94■□□□□ 0.94
LRRC58Q96CX6 FAM99A-202ENST00000538190 1989 ntBASIC20.94■□□□□ 0.94
LRRC58Q96CX6 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
LRRC58Q96CX6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC58Q96CX6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC58Q96CX6 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC58Q96CX6 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC58Q96CX6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.93■□□□□ 0.94
LRRC58Q96CX6 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.93■□□□□ 0.94
LRRC58Q96CX6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.93■□□□□ 0.94
LRRC58Q96CX6 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC58Q96CX6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC58Q96CX6 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC58Q96CX6 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
LRRC58Q96CX6 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC58Q96CX6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC58Q96CX6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LRRC58Q96CX6 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC58Q96CX6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC58Q96CX6 PKD1P6-201ENST00000343738 4769 ntBASIC20.92■□□□□ 0.94
LRRC58Q96CX6 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC58Q96CX6 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.92■□□□□ 0.94
LRRC58Q96CX6 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.92■□□□□ 0.94
LRRC58Q96CX6 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC58Q96CX6 LINC01529-204ENST00000636474 1715 ntBASIC20.92■□□□□ 0.94
LRRC58Q96CX6 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
LRRC58Q96CX6 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC58Q96CX6 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRRC58Q96CX6 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRRC58Q96CX6 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRRC58Q96CX6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
LRRC58Q96CX6 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRRC58Q96CX6 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRRC58Q96CX6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.91■□□□□ 0.94
LRRC58Q96CX6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.91■□□□□ 0.94
LRRC58Q96CX6 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRRC58Q96CX6 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRRC58Q96CX6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRRC58Q96CX6 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.91■□□□□ 0.94
LRRC58Q96CX6 SNX5-217ENST00000606557 1087 ntBASIC20.91■□□□□ 0.94
LRRC58Q96CX6 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
LRRC58Q96CX6 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRRC58Q96CX6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms