Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 AC144652.1-201ENST00000609974 1624 ntBASIC19.14■□□□□ 0.66
FOXRED1Q96CU9 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
FOXRED1Q96CU9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
FOXRED1Q96CU9 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXRED1Q96CU9 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXRED1Q96CU9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXRED1Q96CU9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FOXRED1Q96CU9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
FOXRED1Q96CU9 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXRED1Q96CU9 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXRED1Q96CU9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXRED1Q96CU9 AC103834.1-201ENST00000520383 144 ntBASIC19.14■□□□□ 0.65
FOXRED1Q96CU9 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.14■□□□□ 0.65
FOXRED1Q96CU9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
FOXRED1Q96CU9 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
FOXRED1Q96CU9 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
FOXRED1Q96CU9 AL024507.2-201ENST00000606070 2574 ntBASIC19.14■□□□□ 0.65
FOXRED1Q96CU9 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXRED1Q96CU9 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXRED1Q96CU9 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXRED1Q96CU9 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXRED1Q96CU9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
FOXRED1Q96CU9 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXRED1Q96CU9 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
FOXRED1Q96CU9 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXRED1Q96CU9 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
FOXRED1Q96CU9 AL031848.2-201ENST00000607670 837 ntBASIC19.13■□□□□ 0.65
FOXRED1Q96CU9 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.13■□□□□ 0.65
FOXRED1Q96CU9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
FOXRED1Q96CU9 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXRED1Q96CU9 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXRED1Q96CU9 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXRED1Q96CU9 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
FOXRED1Q96CU9 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.13■□□□□ 0.65
FOXRED1Q96CU9 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
FOXRED1Q96CU9 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
FOXRED1Q96CU9 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXRED1Q96CU9 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.12■□□□□ 0.65
FOXRED1Q96CU9 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.12■□□□□ 0.65
FOXRED1Q96CU9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.12■□□□□ 0.65
FOXRED1Q96CU9 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXRED1Q96CU9 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FOXRED1Q96CU9 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXRED1Q96CU9 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
FOXRED1Q96CU9 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
FOXRED1Q96CU9 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXRED1Q96CU9 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXRED1Q96CU9 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXRED1Q96CU9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXRED1Q96CU9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FOXRED1Q96CU9 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXRED1Q96CU9 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FOXRED1Q96CU9 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.11■□□□□ 0.65
FOXRED1Q96CU9 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.11■□□□□ 0.65
FOXRED1Q96CU9 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXRED1Q96CU9 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FOXRED1Q96CU9 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.11■□□□□ 0.65
FOXRED1Q96CU9 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
FOXRED1Q96CU9 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FOXRED1Q96CU9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FOXRED1Q96CU9 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXRED1Q96CU9 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FOXRED1Q96CU9 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.1■□□□□ 0.65
FOXRED1Q96CU9 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FOXRED1Q96CU9 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FOXRED1Q96CU9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXRED1Q96CU9 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FOXRED1Q96CU9 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXRED1Q96CU9 AC103724.3-201ENST00000564481 992 ntBASIC19.1■□□□□ 0.65
FOXRED1Q96CU9 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
FOXRED1Q96CU9 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXRED1Q96CU9 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FOXRED1Q96CU9 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXRED1Q96CU9 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.1■□□□□ 0.65
FOXRED1Q96CU9 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXRED1Q96CU9 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
FOXRED1Q96CU9 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FOXRED1Q96CU9 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXRED1Q96CU9 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXRED1Q96CU9 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
FOXRED1Q96CU9 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.09■□□□□ 0.65
FOXRED1Q96CU9 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.09■□□□□ 0.65
FOXRED1Q96CU9 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXRED1Q96CU9 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.09■□□□□ 0.65
FOXRED1Q96CU9 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXRED1Q96CU9 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXRED1Q96CU9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXRED1Q96CU9 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXRED1Q96CU9 AC087742.1-201ENST00000575880 1738 ntBASIC19.08■□□□□ 0.65
FOXRED1Q96CU9 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.08■□□□□ 0.65
FOXRED1Q96CU9 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.08■□□□□ 0.65
FOXRED1Q96CU9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
FOXRED1Q96CU9 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
FOXRED1Q96CU9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
FOXRED1Q96CU9 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
FOXRED1Q96CU9 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
FOXRED1Q96CU9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.08■□□□□ 0.65
FOXRED1Q96CU9 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
FOXRED1Q96CU9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
FOXRED1Q96CU9 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms