Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTHRC1Q96CG8 ESRRAP2-201ENST00000418437 1549 ntBASIC20.55■□□□□ 0.88
CTHRC1Q96CG8 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CTHRC1Q96CG8 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CTHRC1Q96CG8 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CTHRC1Q96CG8 AC136469.2-201ENST00000623944 1028 ntBASIC20.55■□□□□ 0.88
CTHRC1Q96CG8 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CTHRC1Q96CG8 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CTHRC1Q96CG8 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CTHRC1Q96CG8 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTHRC1Q96CG8 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CTHRC1Q96CG8 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTHRC1Q96CG8 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CTHRC1Q96CG8 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CTHRC1Q96CG8 AC087742.1-201ENST00000575880 1738 ntBASIC20.54■□□□□ 0.88
CTHRC1Q96CG8 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.54■□□□□ 0.88
CTHRC1Q96CG8 UNC93B3-201ENST00000308076 687 ntBASIC20.54■□□□□ 0.88
CTHRC1Q96CG8 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTHRC1Q96CG8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CTHRC1Q96CG8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTHRC1Q96CG8 OR2I1P-207ENST00000453522 948 ntBASIC20.54■□□□□ 0.88
CTHRC1Q96CG8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.54■□□□□ 0.88
CTHRC1Q96CG8 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.54■□□□□ 0.88
CTHRC1Q96CG8 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CTHRC1Q96CG8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CTHRC1Q96CG8 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.54■□□□□ 0.88
CTHRC1Q96CG8 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CTHRC1Q96CG8 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.53■□□□□ 0.88
CTHRC1Q96CG8 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTHRC1Q96CG8 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.53■□□□□ 0.88
CTHRC1Q96CG8 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.53■□□□□ 0.88
CTHRC1Q96CG8 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.53■□□□□ 0.88
CTHRC1Q96CG8 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.53■□□□□ 0.88
CTHRC1Q96CG8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.53■□□□□ 0.88
CTHRC1Q96CG8 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.53■□□□□ 0.88
CTHRC1Q96CG8 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.53■□□□□ 0.88
CTHRC1Q96CG8 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.53■□□□□ 0.88
CTHRC1Q96CG8 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTHRC1Q96CG8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CTHRC1Q96CG8 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CTHRC1Q96CG8 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CTHRC1Q96CG8 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.53■□□□□ 0.88
CTHRC1Q96CG8 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CTHRC1Q96CG8 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTHRC1Q96CG8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTHRC1Q96CG8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CTHRC1Q96CG8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CTHRC1Q96CG8 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.52■□□□□ 0.88
CTHRC1Q96CG8 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.52■□□□□ 0.88
CTHRC1Q96CG8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CTHRC1Q96CG8 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
CTHRC1Q96CG8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTHRC1Q96CG8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CTHRC1Q96CG8 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CTHRC1Q96CG8 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
CTHRC1Q96CG8 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CTHRC1Q96CG8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTHRC1Q96CG8 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.51■□□□□ 0.87
CTHRC1Q96CG8 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CTHRC1Q96CG8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.51■□□□□ 0.87
CTHRC1Q96CG8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTHRC1Q96CG8 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CTHRC1Q96CG8 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
CTHRC1Q96CG8 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CTHRC1Q96CG8 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CTHRC1Q96CG8 LINC01960-201ENST00000563759 1884 ntBASIC20.51■□□□□ 0.87
CTHRC1Q96CG8 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTHRC1Q96CG8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTHRC1Q96CG8 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.5■□□□□ 0.87
CTHRC1Q96CG8 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CTHRC1Q96CG8 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTHRC1Q96CG8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTHRC1Q96CG8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTHRC1Q96CG8 AL031602.1-201ENST00000633169 911 ntBASIC20.5■□□□□ 0.87
CTHRC1Q96CG8 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTHRC1Q96CG8 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CTHRC1Q96CG8 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CTHRC1Q96CG8 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.5■□□□□ 0.87
CTHRC1Q96CG8 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTHRC1Q96CG8 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTHRC1Q96CG8 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTHRC1Q96CG8 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTHRC1Q96CG8 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CTHRC1Q96CG8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTHRC1Q96CG8 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTHRC1Q96CG8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTHRC1Q96CG8 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTHRC1Q96CG8 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CTHRC1Q96CG8 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.49■□□□□ 0.87
CTHRC1Q96CG8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.49■□□□□ 0.87
CTHRC1Q96CG8 AC096631.2-201ENST00000436136 790 ntBASIC20.49■□□□□ 0.87
CTHRC1Q96CG8 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.49■□□□□ 0.87
CTHRC1Q96CG8 AC024257.2-201ENST00000549699 147 ntBASIC20.49■□□□□ 0.87
CTHRC1Q96CG8 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.49■□□□□ 0.87
CTHRC1Q96CG8 AL136162.1-201ENST00000607711 1078 ntBASIC20.49■□□□□ 0.87
CTHRC1Q96CG8 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTHRC1Q96CG8 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTHRC1Q96CG8 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTHRC1Q96CG8 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTHRC1Q96CG8 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms