Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC17.38■□□□□ 0.37
NPIPB3Q92617 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.38■□□□□ 0.37
NPIPB3Q92617 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
NPIPB3Q92617 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.38■□□□□ 0.37
NPIPB3Q92617 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.38■□□□□ 0.37
NPIPB3Q92617 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NPIPB3Q92617 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NPIPB3Q92617 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NPIPB3Q92617 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NPIPB3Q92617 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
NPIPB3Q92617 AC092053.2-201ENST00000640557 1818 ntBASIC17.37■□□□□ 0.37
NPIPB3Q92617 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NPIPB3Q92617 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NPIPB3Q92617 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
NPIPB3Q92617 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NPIPB3Q92617 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPIPB3Q92617 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NPIPB3Q92617 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPIPB3Q92617 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.37■□□□□ 0.37
NPIPB3Q92617 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.37■□□□□ 0.37
NPIPB3Q92617 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NPIPB3Q92617 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NPIPB3Q92617 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.37■□□□□ 0.37
NPIPB3Q92617 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPIPB3Q92617 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPIPB3Q92617 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
NPIPB3Q92617 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NPIPB3Q92617 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NPIPB3Q92617 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
NPIPB3Q92617 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
NPIPB3Q92617 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.36■□□□□ 0.37
NPIPB3Q92617 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NPIPB3Q92617 AL031848.2-201ENST00000607670 837 ntBASIC17.36■□□□□ 0.37
NPIPB3Q92617 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.36■□□□□ 0.37
NPIPB3Q92617 AC139530.1-201ENST00000575312 1977 ntBASIC17.36■□□□□ 0.37
NPIPB3Q92617 AC080038.3-201ENST00000623346 1952 ntBASIC17.36■□□□□ 0.37
NPIPB3Q92617 AC005703.6-201ENST00000623265 1329 ntBASIC17.36■□□□□ 0.37
NPIPB3Q92617 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.36■□□□□ 0.37
NPIPB3Q92617 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPIPB3Q92617 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPIPB3Q92617 LINC01529-204ENST00000636474 1715 ntBASIC17.35■□□□□ 0.37
NPIPB3Q92617 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPIPB3Q92617 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.35■□□□□ 0.37
NPIPB3Q92617 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NPIPB3Q92617 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPIPB3Q92617 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPIPB3Q92617 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPIPB3Q92617 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPIPB3Q92617 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.35■□□□□ 0.37
NPIPB3Q92617 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
NPIPB3Q92617 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.35■□□□□ 0.37
NPIPB3Q92617 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.35■□□□□ 0.37
NPIPB3Q92617 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPIPB3Q92617 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPIPB3Q92617 AC087742.1-201ENST00000575880 1738 ntBASIC17.35■□□□□ 0.37
NPIPB3Q92617 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPIPB3Q92617 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPIPB3Q92617 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
NPIPB3Q92617 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPIPB3Q92617 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPIPB3Q92617 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPIPB3Q92617 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPIPB3Q92617 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPIPB3Q92617 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPIPB3Q92617 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPIPB3Q92617 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPIPB3Q92617 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.34■□□□□ 0.37
NPIPB3Q92617 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.34■□□□□ 0.37
NPIPB3Q92617 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.34■□□□□ 0.37
NPIPB3Q92617 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.34■□□□□ 0.37
NPIPB3Q92617 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NPIPB3Q92617 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.34■□□□□ 0.37
NPIPB3Q92617 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
NPIPB3Q92617 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
NPIPB3Q92617 MIR6722-201ENST00000617286 78 ntBASIC17.34■□□□□ 0.37
NPIPB3Q92617 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NPIPB3Q92617 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.34■□□□□ 0.37
NPIPB3Q92617 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
NPIPB3Q92617 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NPIPB3Q92617 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NPIPB3Q92617 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
NPIPB3Q92617 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NPIPB3Q92617 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.33■□□□□ 0.37
NPIPB3Q92617 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NPIPB3Q92617 C11orf96-202ENST00000528572 1834 ntBASIC17.33■□□□□ 0.37
NPIPB3Q92617 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NPIPB3Q92617 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NPIPB3Q92617 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.33■□□□□ 0.37
NPIPB3Q92617 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NPIPB3Q92617 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NPIPB3Q92617 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.33■□□□□ 0.36
NPIPB3Q92617 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NPIPB3Q92617 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NPIPB3Q92617 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NPIPB3Q92617 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NPIPB3Q92617 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NPIPB3Q92617 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NPIPB3Q92617 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NPIPB3Q92617 FP325331.1-202ENST00000623531 1380 ntBASIC17.32■□□□□ 0.36
NPIPB3Q92617 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms