Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CNOT9Q92600 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNOT9Q92600 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.28■□□□□ 0.84
CNOT9Q92600 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CNOT9Q92600 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CNOT9Q92600 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CNOT9Q92600 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNOT9Q92600 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNOT9Q92600 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CNOT9Q92600 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CNOT9Q92600 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CNOT9Q92600 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNOT9Q92600 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
CNOT9Q92600 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CNOT9Q92600 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNOT9Q92600 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CNOT9Q92600 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNOT9Q92600 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNOT9Q92600 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CNOT9Q92600 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNOT9Q92600 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNOT9Q92600 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CNOT9Q92600 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNOT9Q92600 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNOT9Q92600 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CNOT9Q92600 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNOT9Q92600 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.27■□□□□ 0.84
CNOT9Q92600 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNOT9Q92600 EP400NL-214ENST00000641289 2402 ntBASIC20.27■□□□□ 0.84
CNOT9Q92600 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNOT9Q92600 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.27■□□□□ 0.83
CNOT9Q92600 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.27■□□□□ 0.83
CNOT9Q92600 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNOT9Q92600 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNOT9Q92600 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNOT9Q92600 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNOT9Q92600 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.26■□□□□ 0.83
CNOT9Q92600 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNOT9Q92600 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CNOT9Q92600 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNOT9Q92600 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.26■□□□□ 0.83
CNOT9Q92600 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.26■□□□□ 0.83
CNOT9Q92600 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.26■□□□□ 0.83
CNOT9Q92600 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNOT9Q92600 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.26■□□□□ 0.83
CNOT9Q92600 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNOT9Q92600 AC087742.1-201ENST00000575880 1738 ntBASIC20.26■□□□□ 0.83
CNOT9Q92600 AC004687.1-201ENST00000579003 1625 ntBASIC20.26■□□□□ 0.83
CNOT9Q92600 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNOT9Q92600 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.25■□□□□ 0.83
CNOT9Q92600 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNOT9Q92600 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CNOT9Q92600 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.25■□□□□ 0.83
CNOT9Q92600 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CNOT9Q92600 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CNOT9Q92600 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.25■□□□□ 0.83
CNOT9Q92600 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
CNOT9Q92600 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.25■□□□□ 0.83
CNOT9Q92600 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.25■□□□□ 0.83
CNOT9Q92600 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNOT9Q92600 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNOT9Q92600 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNOT9Q92600 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNOT9Q92600 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNOT9Q92600 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CNOT9Q92600 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.24■□□□□ 0.83
CNOT9Q92600 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CNOT9Q92600 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNOT9Q92600 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNOT9Q92600 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CNOT9Q92600 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNOT9Q92600 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNOT9Q92600 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNOT9Q92600 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNOT9Q92600 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.24■□□□□ 0.83
CNOT9Q92600 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNOT9Q92600 AC127496.7-201ENST00000625110 1798 ntBASIC20.23■□□□□ 0.83
CNOT9Q92600 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNOT9Q92600 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.23■□□□□ 0.83
CNOT9Q92600 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CNOT9Q92600 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CNOT9Q92600 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.23■□□□□ 0.83
CNOT9Q92600 AC006455.2-201ENST00000429931 906 ntBASIC20.23■□□□□ 0.83
CNOT9Q92600 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CNOT9Q92600 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNOT9Q92600 AL512631.2-201ENST00000604634 923 ntBASIC20.23■□□□□ 0.83
CNOT9Q92600 AL499627.2-201ENST00000606283 725 ntBASIC20.23■□□□□ 0.83
CNOT9Q92600 AC241377.3-202ENST00000626088 1088 ntBASIC20.23■□□□□ 0.83
CNOT9Q92600 AC241585.3-202ENST00000628937 1088 ntBASIC20.23■□□□□ 0.83
CNOT9Q92600 AC245100.8-202ENST00000629247 1058 ntBASIC20.23■□□□□ 0.83
CNOT9Q92600 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
CNOT9Q92600 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNOT9Q92600 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CNOT9Q92600 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNOT9Q92600 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CNOT9Q92600 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.22■□□□□ 0.83
CNOT9Q92600 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.22■□□□□ 0.83
CNOT9Q92600 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNOT9Q92600 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CNOT9Q92600 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms