Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF138Q8WVD3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF138Q8WVD3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RNF138Q8WVD3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RNF138Q8WVD3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
RNF138Q8WVD3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
RNF138Q8WVD3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
RNF138Q8WVD3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF138Q8WVD3 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.1■□□□□ 0.81
RNF138Q8WVD3 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
RNF138Q8WVD3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF138Q8WVD3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RNF138Q8WVD3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.1■□□□□ 0.81
RNF138Q8WVD3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RNF138Q8WVD3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
RNF138Q8WVD3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF138Q8WVD3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RNF138Q8WVD3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF138Q8WVD3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.09■□□□□ 0.81
RNF138Q8WVD3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.09■□□□□ 0.81
RNF138Q8WVD3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.09■□□□□ 0.81
RNF138Q8WVD3 AC068587.7-201ENST00000641602 218 ntBASIC20.09■□□□□ 0.81
RNF138Q8WVD3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RNF138Q8WVD3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF138Q8WVD3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
RNF138Q8WVD3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RNF138Q8WVD3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.08■□□□□ 0.81
RNF138Q8WVD3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF138Q8WVD3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.08■□□□□ 0.81
RNF138Q8WVD3 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF138Q8WVD3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF138Q8WVD3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RNF138Q8WVD3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.08■□□□□ 0.81
RNF138Q8WVD3 AC099791.1-201ENST00000416440 715 ntBASIC20.08■□□□□ 0.81
RNF138Q8WVD3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RNF138Q8WVD3 CA15P2-201ENST00000611168 834 ntBASIC20.08■□□□□ 0.81
RNF138Q8WVD3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RNF138Q8WVD3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
RNF138Q8WVD3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF138Q8WVD3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF138Q8WVD3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF138Q8WVD3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF138Q8WVD3 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF138Q8WVD3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
RNF138Q8WVD3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
RNF138Q8WVD3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RNF138Q8WVD3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF138Q8WVD3 AC142381.2-201ENST00000566120 298 ntBASIC20.07■□□□□ 0.8
RNF138Q8WVD3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF138Q8WVD3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
RNF138Q8WVD3 AC008764.7-201ENST00000593779 1081 ntBASIC20.07■□□□□ 0.8
RNF138Q8WVD3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF138Q8WVD3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF138Q8WVD3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF138Q8WVD3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.07■□□□□ 0.8
RNF138Q8WVD3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF138Q8WVD3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
RNF138Q8WVD3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RNF138Q8WVD3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.06■□□□□ 0.8
RNF138Q8WVD3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF138Q8WVD3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF138Q8WVD3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF138Q8WVD3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF138Q8WVD3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.06■□□□□ 0.8
RNF138Q8WVD3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.06■□□□□ 0.8
RNF138Q8WVD3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF138Q8WVD3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF138Q8WVD3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF138Q8WVD3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF138Q8WVD3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF138Q8WVD3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF138Q8WVD3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.05■□□□□ 0.8
RNF138Q8WVD3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF138Q8WVD3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.05■□□□□ 0.8
RNF138Q8WVD3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF138Q8WVD3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF138Q8WVD3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF138Q8WVD3 AC087742.1-201ENST00000575880 1738 ntBASIC20.05■□□□□ 0.8
RNF138Q8WVD3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF138Q8WVD3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF138Q8WVD3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF138Q8WVD3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF138Q8WVD3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF138Q8WVD3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
RNF138Q8WVD3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF138Q8WVD3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF138Q8WVD3 IGHV3-19-201ENST00000521488 291 ntBASIC20.04■□□□□ 0.8
RNF138Q8WVD3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF138Q8WVD3 LINC01960-201ENST00000563759 1884 ntBASIC20.04■□□□□ 0.8
RNF138Q8WVD3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF138Q8WVD3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF138Q8WVD3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF138Q8WVD3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF138Q8WVD3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF138Q8WVD3 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
RNF138Q8WVD3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
RNF138Q8WVD3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF138Q8WVD3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
RNF138Q8WVD3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RNF138Q8WVD3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms