Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.31■■□□□ 1.16
PTCD2Q8WV60 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.31■■□□□ 1.16
PTCD2Q8WV60 AC099791.2-201ENST00000605725 427 ntBASIC22.31■■□□□ 1.16
PTCD2Q8WV60 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.31■■□□□ 1.16
PTCD2Q8WV60 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
PTCD2Q8WV60 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PTCD2Q8WV60 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.31■■□□□ 1.16
PTCD2Q8WV60 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
PTCD2Q8WV60 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
PTCD2Q8WV60 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.3■■□□□ 1.16
PTCD2Q8WV60 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
PTCD2Q8WV60 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PTCD2Q8WV60 GUSBP5-202ENST00000510805 1989 ntBASIC22.3■■□□□ 1.16
PTCD2Q8WV60 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PTCD2Q8WV60 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PTCD2Q8WV60 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.3■■□□□ 1.16
PTCD2Q8WV60 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PTCD2Q8WV60 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.3■■□□□ 1.16
PTCD2Q8WV60 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PTCD2Q8WV60 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PTCD2Q8WV60 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
PTCD2Q8WV60 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PTCD2Q8WV60 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
PTCD2Q8WV60 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PTCD2Q8WV60 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
PTCD2Q8WV60 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PTCD2Q8WV60 AC006455.2-201ENST00000429931 906 ntBASIC22.29■■□□□ 1.16
PTCD2Q8WV60 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PTCD2Q8WV60 PBX2P1-201ENST00000493219 1291 ntBASIC22.29■■□□□ 1.16
PTCD2Q8WV60 AL136162.1-201ENST00000607711 1078 ntBASIC22.29■■□□□ 1.16
PTCD2Q8WV60 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PTCD2Q8WV60 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PTCD2Q8WV60 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
PTCD2Q8WV60 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PTCD2Q8WV60 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PTCD2Q8WV60 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PTCD2Q8WV60 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.28■■□□□ 1.16
PTCD2Q8WV60 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PTCD2Q8WV60 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.28■■□□□ 1.16
PTCD2Q8WV60 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.28■■□□□ 1.16
PTCD2Q8WV60 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PTCD2Q8WV60 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PTCD2Q8WV60 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
PTCD2Q8WV60 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PTCD2Q8WV60 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PTCD2Q8WV60 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
PTCD2Q8WV60 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.27■■□□□ 1.16
PTCD2Q8WV60 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
PTCD2Q8WV60 ECEL1P1-201ENST00000373592 1742 ntBASIC22.27■■□□□ 1.16
PTCD2Q8WV60 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.27■■□□□ 1.16
PTCD2Q8WV60 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PTCD2Q8WV60 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
PTCD2Q8WV60 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PTCD2Q8WV60 AC024257.2-201ENST00000549699 147 ntBASIC22.27■■□□□ 1.16
PTCD2Q8WV60 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.27■■□□□ 1.16
PTCD2Q8WV60 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PTCD2Q8WV60 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.27■■□□□ 1.16
PTCD2Q8WV60 AC106739.1-201ENST00000617035 715 ntBASIC22.27■■□□□ 1.16
PTCD2Q8WV60 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PTCD2Q8WV60 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.27■■□□□ 1.16
PTCD2Q8WV60 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.27■■□□□ 1.16
PTCD2Q8WV60 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
PTCD2Q8WV60 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
PTCD2Q8WV60 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PTCD2Q8WV60 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PTCD2Q8WV60 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PTCD2Q8WV60 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PTCD2Q8WV60 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.26■■□□□ 1.15
PTCD2Q8WV60 AC005837.3-201ENST00000612163 286 ntBASIC22.26■■□□□ 1.15
PTCD2Q8WV60 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PTCD2Q8WV60 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PTCD2Q8WV60 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.26■■□□□ 1.15
PTCD2Q8WV60 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PTCD2Q8WV60 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.26■■□□□ 1.15
PTCD2Q8WV60 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
PTCD2Q8WV60 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.26■■□□□ 1.15
PTCD2Q8WV60 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PTCD2Q8WV60 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PTCD2Q8WV60 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PTCD2Q8WV60 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.25■■□□□ 1.15
PTCD2Q8WV60 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PTCD2Q8WV60 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
PTCD2Q8WV60 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
PTCD2Q8WV60 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PTCD2Q8WV60 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PTCD2Q8WV60 AC242852.2-201ENST00000615738 1807 ntBASIC22.24■■□□□ 1.15
PTCD2Q8WV60 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
PTCD2Q8WV60 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
PTCD2Q8WV60 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.24■■□□□ 1.15
PTCD2Q8WV60 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.24■■□□□ 1.15
PTCD2Q8WV60 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PTCD2Q8WV60 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PTCD2Q8WV60 SERBP1P1-201ENST00000396021 1160 ntBASIC22.24■■□□□ 1.15
PTCD2Q8WV60 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PTCD2Q8WV60 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PTCD2Q8WV60 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.24■■□□□ 1.15
PTCD2Q8WV60 AL031432.3-201ENST00000607698 485 ntBASIC22.24■■□□□ 1.15
PTCD2Q8WV60 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
PTCD2Q8WV60 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.24■■□□□ 1.15
PTCD2Q8WV60 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms