Protein–RNA interactions for Protein: Q8WUX9

CHMP7, Charged multivesicular body protein 7, humanhuman

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7Q8WUX9 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC36.5■■■■□ 3.43
CHMP7Q8WUX9 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC36.5■■■■□ 3.43
CHMP7Q8WUX9 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC36.5■■■■□ 3.43
CHMP7Q8WUX9 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC36.5■■■■□ 3.43
CHMP7Q8WUX9 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC36.5■■■■□ 3.43
CHMP7Q8WUX9 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC36.5■■■■□ 3.43
CHMP7Q8WUX9 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC36.49■■■■□ 3.43
CHMP7Q8WUX9 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC36.49■■■■□ 3.43
CHMP7Q8WUX9 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC36.49■■■■□ 3.43
CHMP7Q8WUX9 SLC29A4P1-201ENST00000398760 971 ntBASIC36.49■■■■□ 3.43
CHMP7Q8WUX9 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC36.49■■■■□ 3.43
CHMP7Q8WUX9 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC36.49■■■■□ 3.43
CHMP7Q8WUX9 DUX4L16-201ENST00000555130 1264 ntBASIC36.49■■■■□ 3.43
CHMP7Q8WUX9 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC36.49■■■■□ 3.43
CHMP7Q8WUX9 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC36.49■■■■□ 3.43
CHMP7Q8WUX9 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC36.49■■■■□ 3.43
CHMP7Q8WUX9 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC36.49■■■■□ 3.43
CHMP7Q8WUX9 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC36.49■■■■□ 3.43
CHMP7Q8WUX9 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC36.48■■■■□ 3.43
CHMP7Q8WUX9 AC087239.1-201ENST00000622671 572 ntBASIC36.48■■■■□ 3.43
CHMP7Q8WUX9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC36.48■■■■□ 3.43
CHMP7Q8WUX9 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC36.48■■■■□ 3.43
CHMP7Q8WUX9 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC36.47■■■■□ 3.43
CHMP7Q8WUX9 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC36.47■■■■□ 3.43
CHMP7Q8WUX9 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC36.46■■■■□ 3.43
CHMP7Q8WUX9 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC36.46■■■■□ 3.43
CHMP7Q8WUX9 AC007322.1-201ENST00000426983 750 ntBASIC36.46■■■■□ 3.43
CHMP7Q8WUX9 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC36.46■■■■□ 3.43
CHMP7Q8WUX9 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC36.46■■■■□ 3.43
CHMP7Q8WUX9 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC36.46■■■■□ 3.43
CHMP7Q8WUX9 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC36.45■■■■□ 3.43
CHMP7Q8WUX9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC36.45■■■■□ 3.43
CHMP7Q8WUX9 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC36.45■■■■□ 3.43
CHMP7Q8WUX9 AC079140.4-201ENST00000507448 529 ntBASIC36.45■■■■□ 3.43
CHMP7Q8WUX9 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC36.45■■■■□ 3.43
CHMP7Q8WUX9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC36.44■■■■□ 3.42
CHMP7Q8WUX9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC36.44■■■■□ 3.42
CHMP7Q8WUX9 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC36.44■■■■□ 3.42
CHMP7Q8WUX9 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC36.44■■■■□ 3.42
CHMP7Q8WUX9 AC133041.1-202ENST00000642053 222 ntBASIC36.44■■■■□ 3.42
CHMP7Q8WUX9 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC36.44■■■■□ 3.42
CHMP7Q8WUX9 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
CHMP7Q8WUX9 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
CHMP7Q8WUX9 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC36.43■■■■□ 3.42
CHMP7Q8WUX9 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC36.43■■■■□ 3.42
CHMP7Q8WUX9 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC36.43■■■■□ 3.42
CHMP7Q8WUX9 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC36.43■■■■□ 3.42
CHMP7Q8WUX9 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC36.43■■■■□ 3.42
CHMP7Q8WUX9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
CHMP7Q8WUX9 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC36.43■■■■□ 3.42
CHMP7Q8WUX9 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC36.42■■■■□ 3.42
CHMP7Q8WUX9 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC36.42■■■■□ 3.42
CHMP7Q8WUX9 POU5F1P3-201ENST00000428824 1078 ntBASIC36.42■■■■□ 3.42
CHMP7Q8WUX9 AC073210.2-201ENST00000430369 194 ntBASIC36.42■■■■□ 3.42
CHMP7Q8WUX9 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC36.42■■■■□ 3.42
CHMP7Q8WUX9 ITM2C-210ENST00000620962 501 ntBASIC36.42■■■■□ 3.42
CHMP7Q8WUX9 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC36.42■■■■□ 3.42
CHMP7Q8WUX9 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC36.42■■■■□ 3.42
CHMP7Q8WUX9 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC36.42■■■■□ 3.42
CHMP7Q8WUX9 CEBPA-AS1-201ENST00000592982 2198 ntBASIC36.42■■■■□ 3.42
CHMP7Q8WUX9 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC36.41■■■■□ 3.42
CHMP7Q8WUX9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC36.41■■■■□ 3.42
CHMP7Q8WUX9 SHF-207ENST00000560540 2062 ntTSL 5 BASIC36.41■■■■□ 3.42
CHMP7Q8WUX9 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
CHMP7Q8WUX9 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
CHMP7Q8WUX9 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC36.41■■■■□ 3.42
CHMP7Q8WUX9 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC36.41■■■■□ 3.42
CHMP7Q8WUX9 SMUG1P1-201ENST00000590640 811 ntBASIC36.41■■■■□ 3.42
CHMP7Q8WUX9 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
CHMP7Q8WUX9 LINC01529-204ENST00000636474 1715 ntBASIC36.41■■■■□ 3.42
CHMP7Q8WUX9 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC36.4■■■■□ 3.42
CHMP7Q8WUX9 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC36.4■■■■□ 3.42
CHMP7Q8WUX9 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC36.4■■■■□ 3.42
CHMP7Q8WUX9 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC36.4■■■■□ 3.42
CHMP7Q8WUX9 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC36.4■■■■□ 3.42
CHMP7Q8WUX9 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
CHMP7Q8WUX9 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
CHMP7Q8WUX9 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC36.39■■■■□ 3.42
CHMP7Q8WUX9 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC36.39■■■■□ 3.42
CHMP7Q8WUX9 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC36.39■■■■□ 3.42
CHMP7Q8WUX9 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
CHMP7Q8WUX9 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
CHMP7Q8WUX9 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
CHMP7Q8WUX9 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC36.38■■■■□ 3.41
CHMP7Q8WUX9 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC36.38■■■■□ 3.41
CHMP7Q8WUX9 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.41
CHMP7Q8WUX9 AC098934.4-201ENST00000564127 592 ntBASIC36.38■■■■□ 3.41
CHMP7Q8WUX9 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC36.38■■■■□ 3.41
CHMP7Q8WUX9 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
CHMP7Q8WUX9 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC36.37■■■■□ 3.41
CHMP7Q8WUX9 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC36.37■■■■□ 3.41
CHMP7Q8WUX9 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC36.37■■■■□ 3.41
CHMP7Q8WUX9 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC36.36■■■■□ 3.41
CHMP7Q8WUX9 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC36.36■■■■□ 3.41
CHMP7Q8WUX9 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC36.36■■■■□ 3.41
CHMP7Q8WUX9 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC36.36■■■■□ 3.41
CHMP7Q8WUX9 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC36.36■■■■□ 3.41
CHMP7Q8WUX9 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC36.36■■■■□ 3.41
CHMP7Q8WUX9 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC36.35■■■■□ 3.41
CHMP7Q8WUX9 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC36.35■■■■□ 3.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms