Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
BBS1Q8NFJ9 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BBS1Q8NFJ9 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
BBS1Q8NFJ9 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BBS1Q8NFJ9 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BBS1Q8NFJ9 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BBS1Q8NFJ9 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
BBS1Q8NFJ9 AC103834.1-201ENST00000520383 144 ntBASIC19.82■□□□□ 0.76
BBS1Q8NFJ9 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.82■□□□□ 0.76
BBS1Q8NFJ9 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
BBS1Q8NFJ9 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
BBS1Q8NFJ9 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
BBS1Q8NFJ9 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
BBS1Q8NFJ9 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
BBS1Q8NFJ9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
BBS1Q8NFJ9 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
BBS1Q8NFJ9 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
BBS1Q8NFJ9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.81■□□□□ 0.76
BBS1Q8NFJ9 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
BBS1Q8NFJ9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.81■□□□□ 0.76
BBS1Q8NFJ9 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.81■□□□□ 0.76
BBS1Q8NFJ9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.81■□□□□ 0.76
BBS1Q8NFJ9 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.81■□□□□ 0.76
BBS1Q8NFJ9 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
BBS1Q8NFJ9 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
BBS1Q8NFJ9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
BBS1Q8NFJ9 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.8■□□□□ 0.76
BBS1Q8NFJ9 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
BBS1Q8NFJ9 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
BBS1Q8NFJ9 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BBS1Q8NFJ9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
BBS1Q8NFJ9 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
BBS1Q8NFJ9 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.79■□□□□ 0.76
BBS1Q8NFJ9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
BBS1Q8NFJ9 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.79■□□□□ 0.76
BBS1Q8NFJ9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BBS1Q8NFJ9 KRT8P33-201ENST00000508125 1423 ntBASIC19.79■□□□□ 0.76
BBS1Q8NFJ9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.79■□□□□ 0.76
BBS1Q8NFJ9 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.79■□□□□ 0.76
BBS1Q8NFJ9 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
BBS1Q8NFJ9 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.79■□□□□ 0.76
BBS1Q8NFJ9 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BBS1Q8NFJ9 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
BBS1Q8NFJ9 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
BBS1Q8NFJ9 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BBS1Q8NFJ9 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BBS1Q8NFJ9 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BBS1Q8NFJ9 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BBS1Q8NFJ9 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BBS1Q8NFJ9 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
BBS1Q8NFJ9 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.78■□□□□ 0.76
BBS1Q8NFJ9 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BBS1Q8NFJ9 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
BBS1Q8NFJ9 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.78■□□□□ 0.76
BBS1Q8NFJ9 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BBS1Q8NFJ9 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
BBS1Q8NFJ9 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BBS1Q8NFJ9 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BBS1Q8NFJ9 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
BBS1Q8NFJ9 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
BBS1Q8NFJ9 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.77■□□□□ 0.76
BBS1Q8NFJ9 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BBS1Q8NFJ9 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.77■□□□□ 0.76
BBS1Q8NFJ9 AC103724.3-201ENST00000564481 992 ntBASIC19.77■□□□□ 0.76
BBS1Q8NFJ9 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.77■□□□□ 0.76
BBS1Q8NFJ9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
BBS1Q8NFJ9 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BBS1Q8NFJ9 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
BBS1Q8NFJ9 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
BBS1Q8NFJ9 LINC01529-204ENST00000636474 1715 ntBASIC19.76■□□□□ 0.75
BBS1Q8NFJ9 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
BBS1Q8NFJ9 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
BBS1Q8NFJ9 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BBS1Q8NFJ9 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
BBS1Q8NFJ9 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
BBS1Q8NFJ9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.76■□□□□ 0.75
BBS1Q8NFJ9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.76■□□□□ 0.75
BBS1Q8NFJ9 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
BBS1Q8NFJ9 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
BBS1Q8NFJ9 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.76■□□□□ 0.75
BBS1Q8NFJ9 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.75■□□□□ 0.75
BBS1Q8NFJ9 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BBS1Q8NFJ9 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
BBS1Q8NFJ9 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
BBS1Q8NFJ9 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
BBS1Q8NFJ9 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BBS1Q8NFJ9 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.75■□□□□ 0.75
BBS1Q8NFJ9 AL033527.3-201ENST00000566366 1196 ntBASIC19.75■□□□□ 0.75
BBS1Q8NFJ9 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.75■□□□□ 0.75
BBS1Q8NFJ9 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BBS1Q8NFJ9 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BBS1Q8NFJ9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BBS1Q8NFJ9 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BBS1Q8NFJ9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.75■□□□□ 0.75
BBS1Q8NFJ9 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BBS1Q8NFJ9 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BBS1Q8NFJ9 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
BBS1Q8NFJ9 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
BBS1Q8NFJ9 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
BBS1Q8NFJ9 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms